4b4x: Difference between revisions

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<StructureSection load='4b4x' size='340' side='right'caption='[[4b4x]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
<StructureSection load='4b4x' size='340' side='right'caption='[[4b4x]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4b4x]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Actsp Actsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B4X OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4B4X FirstGlance]. <br>
<table><tr><td colspan='2'>[[4b4x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actsp Actsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B4X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4B4X FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HQZ:TRIHYDROXY{(1S)-1-[(METHYLSULFONYL)AMINO]ETHYL}BORATE(1-)'>HQZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HQZ:TRIHYDROXY{(1S)-1-[(METHYLSULFONYL)AMINO]ETHYL}BORATE(1-)'>HQZ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1w79|1w79]], [[1w8q|1w8q]], [[1w8y|1w8y]], [[2vgj|2vgj]], [[2vgk|2vgk]], [[2wke|2wke]], [[2xdm|2xdm]], [[2xk1|2xk1]], [[2xln|2xln]], [[2y4a|2y4a]], [[2y55|2y55]], [[2y59|2y59]], [[3zvt|3zvt]], [[3zvw|3zvw]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1w79|1w79]], [[1w8q|1w8q]], [[1w8y|1w8y]], [[2vgj|2vgj]], [[2vgk|2vgk]], [[2wke|2wke]], [[2xdm|2xdm]], [[2xk1|2xk1]], [[2xln|2xln]], [[2y4a|2y4a]], [[2y55|2y55]], [[2y59|2y59]], [[3zvt|3zvt]], [[3zvw|3zvw]]</div></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4b4x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b4x OCA], [http://pdbe.org/4b4x PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4b4x RCSB], [http://www.ebi.ac.uk/pdbsum/4b4x PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4b4x ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4b4x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b4x OCA], [https://pdbe.org/4b4x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4b4x RCSB], [https://www.ebi.ac.uk/pdbsum/4b4x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4b4x ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP]] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.  
[[https://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP]] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.  


==See Also==
==See Also==
*[[Carboxypeptidase|Carboxypeptidase]]
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Revision as of 09:59, 31 August 2022

Crystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitorCrystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitor

Structural highlights

4b4x is a 4 chain structure with sequence from Actsp. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Activity:Serine-type D-Ala-D-Ala carboxypeptidase, with EC number 3.4.16.4
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[DAC_ACTSP] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.

See Also

4b4x, resolution 2.65Å

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