User:Eric Martz/Sandbox 4: Difference between revisions
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Eric Martz (talk | contribs) No edit summary |
Eric Martz (talk | contribs) No edit summary |
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However, when a .spt file containing those commands is dropped into JSmol, the capsid loads, but the spacefill and color commands do not execute. I don't know why they fail. | However, when a .spt file containing those commands is dropped into JSmol, the capsid loads, but the spacefill and color commands do not execute. I don't know why they fail. | ||
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FAILS BECAUSE CAPTION CONTAINS SEMICOLON: | |||
<scene name='85/859610/Half_capsid_spt_minus_props/1'>Half Capsid by Script</scene>: Scene created by dropping half-capsid-nodata.spt into JSmol after first loading 1sva. State script load command modified to | |||
load "" FILTER "*.CA;biomolecule 1;bmchains;/=5"; and function _setDataState() made an empty function {} (previously it assigned distances from center to each of ~25,000 alpha carbons). | |||
</StructureSection> | </StructureSection> | ||
Revision as of 22:12, 25 July 2022
This green link is a <jmolLink> that directly loads an uploaded script (a modified state script). When the script is dropped into Jmol.jar 14.31.8 (current main version in Proteopedia) it works (3 unrecognized but harmless set commands) even though the script was written from JSmol 14.32.64.
The load command in the script loads a "frozen" uploaded PDB file File:1sva-revdat2009.pdb.gz.
FAILS BECAUSE CAPTION CONTAINS SEMICOLON: : Scene created by dropping half-capsid-nodata.spt into JSmol after first loading 1sva. State script load command modified to load "" FILTER "*.CA;biomolecule 1;bmchains;/=5"; and function _setDataState() made an empty function {} (previously it assigned distances from center to each of ~25,000 alpha carbons).
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