3pn3: Difference between revisions
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<StructureSection load='3pn3' size='340' side='right'caption='[[3pn3]], [[Resolution|resolution]] 1.30Å' scene=''> | <StructureSection load='3pn3' size='340' side='right'caption='[[3pn3]], [[Resolution|resolution]] 1.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3pn3]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3pn3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PN3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PN3 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PN3:TERT-BUTYL+{(2S)-1-[FORMYL(HYDROXY)AMINO]-3-PHENYLPROPAN-2-YL}CARBAMATE'>PN3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PN3:TERT-BUTYL+{(2S)-1-[FORMYL(HYDROXY)AMINO]-3-PHENYLPROPAN-2-YL}CARBAMATE'>PN3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3pn2|3pn2]], [[3pn6|3pn6]], [[3pn4|3pn4]], [[3pn5|3pn5]], [[3m6o|3m6o]], [[3o3j|3o3j]], [[3m6q|3m6q]], [[3m6r|3m6r]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3pn2|3pn2]], [[3pn6|3pn6]], [[3pn4|3pn4]], [[3pn5|3pn5]], [[3m6o|3m6o]], [[3o3j|3o3j]], [[3m6q|3m6q]], [[3m6r|3m6r]]</div></td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DEF2, PDF1B ([ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DEF2, PDF1B ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pn3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pn3 OCA], [https://pdbe.org/3pn3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pn3 RCSB], [https://www.ebi.ac.uk/pdbsum/3pn3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pn3 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[[ | [[https://www.uniprot.org/uniprot/DEF1B_ARATH DEF1B_ARATH]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Has a preferred substrate specificity towards the photosystem II (PS II) D1 polypeptide.<ref>PMID:11060042</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||