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Thermolysin 3D structures: Difference between revisions

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{{#tree:id=OrganizedByTopic|openlevels=0|


* Thermolysin  
* Thermolysin; Domains – C-terminal 233-548


**[[2whz]], [[3fvp]], [[3dnz]], [[3do0]], [[3do1]], [[3do2]], [[2g4z]], [[2a7g]], [[1gxw]], [[1kei]], [[1l3f]], [[1tlx]], [[2tlx]], [[8tln]], [[3p7p]], [[3p7q]], [[3p7r]], [[3p7s]], [[3p7t]], [[3p7u]], [[3p7v]], [[3p7w]], [[3zi6]], [[5dlh]], [[5tli]], [[6tli]], [[7tli]], [[8tli]], [[5un3]], [[5uu7]], [[5wr2]], [[5wr3]], [[5wr4]], [[5wr5]], [[5wr6]], [[5a3y]], [[5o8n]], [[5uu8]], [[5uu9]], [[5uua]], [[5uub]], [[5uuc]], [[5uud]], [[5uue]], [[5t9i]], [[5t9k]], [[5t9q]], [[5tac]], [[5tad]], [[5tae]], [[5tai]], [[5hqd]], [[6tli]], [[7tli]], [[8tli]], [[6d5o]], [[6fsm]], [[6d5p]], [[6d5q]], [[6d5r]], [[6d5s]], [[6d5t]], [[6d5u]], [[6fj2]], [[6scu]], [[6sck]] – TML<br />
**[[2whz]], [[3fvp]], [[3dnz]], [[3do0]], [[3do1]], [[3do2]], [[2g4z]], [[2a7g]], [[1gxw]], [[1kei]], [[1l3f]], [[1tlx]], [[2tlx]], [[8tln]], [[3p7p]], [[3p7q]], [[3p7r]], [[3p7s]], [[3p7t]], [[3p7u]], [[3p7v]], [[3p7w]], [[3zi6]], [[5dlh]], [[5tli]], [[6tli]], [[7tli]], [[8tli]], [[5un3]], [[5uu7]], [[5wr2]], [[5wr3]], [[5wr4]], [[5wr5]], [[5wr6]], [[5a3y]], [[5o8n]], [[5uu8]], [[5uu9]], [[5uua]], [[5uub]], [[5uuc]], [[5uud]], [[5uue]], [[5t9i]], [[5t9k]], [[5t9q]], [[5tac]], [[5tad]], [[5tae]], [[5tai]], [[5hqd]], [[6tli]], [[7tli]], [[8tli]], [[6d5o]], [[6fsm]], [[6d5p]], [[6d5q]], [[6d5r]], [[6d5s]], [[6d5t]], [[6d5u]], [[6fj2]], [[6scu]], [[6sck]] – TMLC-terminal domain<br />
**[[5dlh]] – TML - electron crystallography<br />
**[[5dlh]], [[6zhj]] – TML C-terminal domain - electron crystallography<br />
**[[3ls7]], [[4ow3]], [[4tnl]] - TML residues 233-548<br />
**[[3ls7]], [[4ow3]], [[4tnl]] - TML C-terminal domain<br />
**[[1trl]] - TML residues 255-316 – NMR<br />
**[[1trl]] - TML residues 255-316 – NMR<br />
**[[3fxs]], [[3fbo]], [[3eim]], [[1lna]], [[1lnb]], [[1lnc]], [[1lnd]], [[1lne]], [[1lnf]] - TML residues 233-548+metal ion replacing Ca<br />
**[[3fxs]], [[3fbo]], [[3eim]], [[1lna]], [[1lnb]], [[1lnc]], [[1lnd]], [[1lne]], [[1lnf]] - TML C-terminal domain+metal ion replacing Ca<br />


*Thermolysin TML+transition state analog  
*Thermolysin TML+transition state analog  
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**[[1kl6]] – TML residues 1-316 + Ala<br />
**[[1kl6]] – TML residues 1-316 + Ala<br />
**[[4m65]] – TML residues 1-316 + Asn<br />
**[[4m65]] – TML residues 1-316 + Asn<br />
**[[3qgo]] – TML + Phe methyl ester<br />
**[[3qgo]] – TML C-terminal domain + Phe methyl ester<br />
**[[3qh1]] – TML + benzyloxycarboxyl-Asp<br />
**[[3qh1]] – TML C-terminal domain + benzyloxycarboxyl-Asp<br />
**[[3qh5]] – TML + benzyloxycarboxyl-Asp + Phe methyl ester<br />
**[[3qh5]] – TML C-terminal domain + benzyloxycarboxyl-Asp + Phe methyl ester<br />
**[[5t9k]], [[5t9q]], [[5t9i]], [[5tak]], [[5taj]], [[5fsj]], [[5fsp]], [[5fss]], [[5fxn]], [[6d5o]], [[6d5p]], [[6d5q]], [[6d5r]], [[6d5s]], [[6d5t]], [[6d5u]], [[6d5n]], [[6fj2]], [[5a3y]], [[6fsm]], [[8tln]] – TML residues 233-548 + Val + Lys <br />
**[[5t9k]], [[5t9q]], [[5t9i]], [[5tak]], [[5taj]], [[5fsj]], [[5fsp]], [[5fss]], [[5fxn]], [[6d5o]], [[6d5p]], [[6d5q]], [[6d5r]], [[6d5s]], [[6d5t]], [[6d5u]], [[6d5n]], [[6fj2]], [[5a3y]], [[6fsm]], [[7akn]], [[8tln]] – TMLC-terminal domain + Val + Lys <br />
**[[6ig7]], [[6qf2]] – TML residues 233-548 + Leu + Lys <br />
**[[6ig7]], [[6qf2]] – TML C-terminal domain + Leu + Lys <br />
**[[6qf3]] – TML residues 233-548 + Asp <br />
**[[6qf3]] – TMLC-terminal domain + Asp <br />
**[[6sc3]] – TML residues 233-548 + Phe <br />
**[[6sc3]] – TML C-terminal domain + Phe <br />
**[[6sel]] – TML residues 233-548 + Lys <br />
**[[6sel]] – TML C-terminal domain + Lys <br />


*Thermolysin + polypeptide  
*Thermolysin + polypeptide  


**[[2wi0]], [[3tmn]], [[8tln]] – TMLresidues 1-316 + dipeptide <br />
**[[2wi0]], [[3tmn]], [[8tln]] – TMLresidues 1-316 + dipeptide <br />
**[[3fgd]] - TML residues 233-548+dipeptide<br />
**[[3fgd]] - TMLC-terminal domain +dipeptide<br />
**[[5onp]], [[5onq]], [[5onr]], [[6ghx]] – TML residues 233-551 + amyloid-β peptide<br />
**[[5onp]], [[5onq]], [[5onr]], [[6ghx]] – TML C-terminal domain + amyloid-β peptide<br />


*Thermolysin + inhibitor  
*Thermolysin + inhibitor  


**[[1fjo]], [[1fj3]], [[1fjq]], [[1fjt]], [[1fju]], [[1fjv]], [[1fjw]], [[4tli]], [[5tli]], [[6tli]], [[7tli]], [[8tli]], [[1tli]], [[2tli]], [[3tli]] – TML residues 1-316 in organic solvents<br />
**[[1fjo]], [[1fj3]], [[1fjq]], [[1fjt]], [[1fju]], [[1fjv]], [[1fjw]], [[4tli]], [[5tli]], [[6tli]], [[7tli]], [[8tli]], [[1tli]], [[2tli]], [[3tli]] – TML residues 1-316 in organic solvents<br />
**[[3fv4]], [[3fxp]], [[3flf]], [[3fb0]], [[3fcq]], [[3f28]], [[3f2p]], [[4mtw]], [[4mwp]], [[4mxj]], [[4mzn]], [[4n4e]], [[4n5p]], [[4n66]], [[4oi5]], [[3for]], [[1y3g]], [[1zdp]], [[1z9g]], [[1os0]], [[1thl]], [[3ms3]], [[3msa]], [[3msf]], [[3msn]], [[3n21]], [[3nn7]], [[3t73]], [[3t74]], [[3t8c]], [[3t8d]], [[3t8f]], [[3t8g]], [[3t8h]], [[4h57]], [[4d9w]], [[4d91]], [[5l3u]], [[5l41]], [[5l8p]], [[6sb9]], [[6sbk]], [[5lwd]], [[5lif]], [[5ma7]], [[5m9w]], [[5m69]], [[5m5f]], [[5lvd]], [[6sc0]], [[6sc1]], [[5jvi]], [[5jxn]], [[5js3]], [[5jt9]], [[5jss]], [[5dpf]], [[5dpe]] – TML residues 233-548+inhibitor
**[[3fv4]], [[3fxp]], [[3flf]], [[3fb0]], [[3fcq]], [[3f28]], [[3f2p]], [[4mtw]], [[4mwp]], [[4mxj]], [[4mzn]], [[4n4e]], [[4n5p]], [[4n66]], [[4oi5]], [[3for]], [[1y3g]], [[1zdp]], [[1z9g]], [[1os0]], [[1thl]], [[3ms3]], [[3msa]], [[3msf]], [[3msn]], [[3n21]], [[3nn7]], [[3t73]], [[3t74]], [[3t8c]], [[3t8d]], [[3t8f]], [[3t8g]], [[3t8h]], [[4h57]], [[4d9w]], [[4d91]], [[5l3u]], [[5l41]], [[5l8p]], [[6sb9]], [[6sbk]], [[5lwd]], [[5lif]], [[5ma7]], [[5m9w]], [[5m69]], [[5m5f]], [[5lvd]], [[6sc0]], [[6sc1]], [[5jvi]], [[5jxn]], [[5js3]], [[5jt9]], [[5jss]], [[5dpf]], [[5dpe]], [[6y4i]], [[6yi6]], [[6ymr]], [[6yms]] – TMLC-terminal domain +inhibitor<br />
**[[1pe5]], [[6tmn]], [[7tln]], [[4tln]], [[5tln]], [[1hyt]], [[1qf0]], [[1qf1]], [[1qf2]], [[1kjp]], [[1kjo]], [[1kto]], [[1ks7]], [[1kro]], [[1kr6]], [[1kkk]], [[pe7]], [[1pe8]]  – TML residues 1-316 + inhibitor <br />
**[[1pe5]], [[6tmn]], [[7tln]], [[4tln]], [[5tln]], [[1hyt]], [[1qf0]], [[1qf1]], [[1qf2]], [[1kjp]], [[1kjo]], [[1kto]], [[1ks7]], [[1kro]], [[1kr6]], [[1kkk]], [[pe7]], [[1pe8]]  – TML residues 1-316 + inhibitor <br />
**[[3ssb]] – TML residues 233-548 + Impi-α<br />
**[[3ssb]] – TML C-terminal domain + Impi-α<br />
**[[3t2h]] – TML residues 233-548 + trimethylamine oxide<br />
**[[3t2h]] – TML C-terminal domain + trimethylamine oxide<br />
**[[3t2i]] – TML residues 233-548 + sarcosine<br />
**[[3t2i]] – TMLC-terminal domain + sarcosine<br />
**[[3t2j]] – TML residues 233-548 + betaine<br />
**[[3t2j]] – TML C-terminal domain + betaine<br />
**[[6fhp]] – TML C terminal 490-551 + DAIP<br />
**[[6fhp]] – TML C terminal 490-551 + DAIP<br />
**[[5wr2]], [[5wr5]], [[5wr4]], [[5rw6]] – GsTML residues 233-548 + oil-based carrier – ''Geobacillus stearothermophilus''<br />
**[[5wr2]], [[5wr5]], [[5wr4]], [[5rw6]] – GsTML C-terminal domain + oil-based carrier – ''Geobacillus stearothermophilus''<br />
}}
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[[Category: Topic Page]]
[[Category: Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky
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