1gr1: Difference between revisions

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[[Image:1gr1.jpg|left|200px]]
[[Image:1gr1.jpg|left|200px]]


{{Structure
<!--
|PDB= 1gr1 |SIZE=350|CAPTION= <scene name='initialview01'>1gr1</scene>, resolution 2.5&Aring;
The line below this paragraph, containing "STRUCTURE_1gr1", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=FAD:Fad+Binding+Site+For+Chain+A'>FAD</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
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|DOMAIN=
{{STRUCTURE_1gr1| PDB=1gr1  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gr1 OCA], [http://www.ebi.ac.uk/pdbsum/1gr1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gr1 RCSB]</span>
}}


'''STRUCTURE OF FERREDOXIN-NADP+ REDUCTASE WITH GLU 139 REPLACED BY LYS (E139K)'''
'''STRUCTURE OF FERREDOXIN-NADP+ REDUCTASE WITH GLU 139 REPLACED BY LYS (E139K)'''
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Probing the role of glutamic acid 139 of Anabaena ferredoxin-NADP+ reductase in the interaction with substrates., Faro M, Frago S, Mayoral T, Hermoso JA, Sanz-Aparicio J, Gomez-Moreno C, Medina M, Eur J Biochem. 2002 Oct;269(20):4938-47. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12383252 12383252]
Probing the role of glutamic acid 139 of Anabaena ferredoxin-NADP+ reductase in the interaction with substrates., Faro M, Frago S, Mayoral T, Hermoso JA, Sanz-Aparicio J, Gomez-Moreno C, Medina M, Eur J Biochem. 2002 Oct;269(20):4938-47. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12383252 12383252]
[[Category: Anabaena sp.]]
[[Category: Anabaena sp.]]
[[Category: Ferredoxin--NADP(+) reductase]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Gomez-Moreno, C.]]
[[Category: Gomez-Moreno, C.]]
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[[Category: Medina, M.]]
[[Category: Medina, M.]]
[[Category: Sanz-Aparicio, J.]]
[[Category: Sanz-Aparicio, J.]]
[[Category: fad]]
[[Category: Fad]]
[[Category: flavoprotein]]
[[Category: Flavoprotein]]
[[Category: fnr]]
[[Category: Fnr]]
[[Category: nadp+ reductase]]
[[Category: Nadp+ reductase]]
[[Category: oxidoreductase]]
[[Category: Oxidoreductase]]
 
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Revision as of 17:54, 2 May 2008

File:1gr1.jpg

Template:STRUCTURE 1gr1

STRUCTURE OF FERREDOXIN-NADP+ REDUCTASE WITH GLU 139 REPLACED BY LYS (E139K)


OverviewOverview

The role of the negative charge of the E139 side-chain of Anabaena Ferredoxin-NADP+ reductase (FNR) in steering appropriate docking with its substrates ferredoxin, flavodoxin and NADP+/H, that leads to efficient electron transfer (ET) is analysed by characterization of several E139 FNR mutants. Replacement of E139 affects the interaction with the different FNR substrates in very different ways. Thus, while E139 does not appear to be involved in the processes of binding and ET between FNR and NADP+/H, the nature and the conformation of the residue at position 139 of Anabaena FNR modulates the precise enzyme interaction with the protein carriers ferredoxin (Fd) and flavodoxin (Fld). Introduction of the shorter aspartic acid side-chain at position 139 produces an enzyme that interacts more weakly with both ET proteins. Moreover, the removal of the charge, as in the E139Q mutant, or the charge-reversal mutation, as in E139K FNR, apparently enhances additional interaction modes of the enzyme with Fd, and reduces the possible orientations with Fld to more productive and stronger ones. Hence, removal of the negative charge at position 139 of Anabaena FNR produces a deleterious effect in its ET reactions with Fd whereas it appears to enhance the ET processes with Fld. Significantly, a large structural variation is observed for the E139 side-chain conformer in different FNR structures, including the E139K mutant. In this case, a positive potential region replaces a negative one in the wild-type enzyme. Our observations further confirm the contribution of both attractive and repulsive interactions in achieving the optimal orientation for efficient ET between FNR and its protein carriers.

About this StructureAbout this Structure

1GR1 is a Single protein structure of sequence from Anabaena sp.. Full crystallographic information is available from OCA.

ReferenceReference

Probing the role of glutamic acid 139 of Anabaena ferredoxin-NADP+ reductase in the interaction with substrates., Faro M, Frago S, Mayoral T, Hermoso JA, Sanz-Aparicio J, Gomez-Moreno C, Medina M, Eur J Biochem. 2002 Oct;269(20):4938-47. PMID:12383252 Page seeded by OCA on Fri May 2 17:54:57 2008

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