3glv: Difference between revisions

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==Crystal structure of the lipopolysaccharide core biosynthesis protein from Thermoplasma volcanium GSS1==
==Crystal structure of the lipopolysaccharide core biosynthesis protein from Thermoplasma volcanium GSS1==
<StructureSection load='3glv' size='340' side='right' caption='[[3glv]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
<StructureSection load='3glv' size='340' side='right'caption='[[3glv]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3glv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thevo Thevo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GLV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GLV FirstGlance]. <br>
<table><tr><td colspan='2'>[[3glv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thevo Thevo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GLV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GLV FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GI:14325477, TV1239, TVG1279046 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273116 THEVO])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GI:14325477, TV1239, TVG1279046 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273116 THEVO])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3glv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3glv OCA], [http://pdbe.org/3glv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3glv RCSB], [http://www.ebi.ac.uk/pdbsum/3glv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3glv ProSAT], [http://www.topsan.org/Proteins/MCSG/3glv TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3glv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3glv OCA], [https://pdbe.org/3glv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3glv RCSB], [https://www.ebi.ac.uk/pdbsum/3glv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3glv ProSAT], [https://www.topsan.org/Proteins/MCSG/3glv TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RIBL_THEVO RIBL_THEVO]] Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.  
[[https://www.uniprot.org/uniprot/RIBL_THEVO RIBL_THEVO]] Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gl/3glv_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gl/3glv_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Thevo]]
[[Category: Thevo]]
[[Category: Clancy, S]]
[[Category: Clancy, S]]

Revision as of 11:08, 9 March 2022

Crystal structure of the lipopolysaccharide core biosynthesis protein from Thermoplasma volcanium GSS1Crystal structure of the lipopolysaccharide core biosynthesis protein from Thermoplasma volcanium GSS1

Structural highlights

3glv is a 2 chain structure with sequence from Thevo. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Gene:GI:14325477, TV1239, TVG1279046 (THEVO)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[RIBL_THEVO] Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3glv, resolution 1.99Å

Drag the structure with the mouse to rotate

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