3fn9: Difference between revisions

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==Crystal structure of putative beta-galactosidase from bacteroides fragilis==
==Crystal structure of putative beta-galactosidase from bacteroides fragilis==
<StructureSection load='3fn9' size='340' side='right' caption='[[3fn9]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='3fn9' size='340' side='right'caption='[[3fn9]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3fn9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacfn Bacfn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FN9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FN9 FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FN9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FN9 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fn9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fn9 OCA], [https://pdbe.org/3fn9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fn9 RCSB], [https://www.ebi.ac.uk/pdbsum/3fn9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fn9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3fn9 TOPSAN]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0029 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272559 BACFN])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-galactosidase Beta-galactosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.23 3.2.1.23] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fn9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fn9 OCA], [http://pdbe.org/3fn9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fn9 RCSB], [http://www.ebi.ac.uk/pdbsum/3fn9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fn9 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3fn9 TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fn/3fn9_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fn/3fn9_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacfn]]
[[Category: Large Structures]]
[[Category: Beta-galactosidase]]
[[Category: Almo SC]]
[[Category: Almo, S C]]
[[Category: Burley SK]]
[[Category: Burley, S K]]
[[Category: Ramagopal UA]]
[[Category: Structural genomic]]
[[Category: Toro R]]
[[Category: Ramagopal, U A]]
[[Category: Toro, R]]
[[Category: Glycosidase]]
[[Category: Hydrolase]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]
[[Category: Putative beta-galactosidase]]

Revision as of 11:05, 2 March 2022

Crystal structure of putative beta-galactosidase from bacteroides fragilisCrystal structure of putative beta-galactosidase from bacteroides fragilis

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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