3dr5: Difference between revisions

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OCA

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 ==Crystal structure of the Q8NRD3_CORGL protein from Corynebacterium glutamicum. Northeast Structural Genomics Consortium target CgR117.==
-<StructureSection load='3dr5' size='340' side='right' caption='[[3dr5]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
+<StructureSection load='3dr5' size='340' side='right'caption='[[3dr5]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3dr5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_glutamicus"_kinoshita_et_al._1958 "micrococcus glutamicus" kinoshita et al. 1958]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DR5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DR5 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3dr5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_glutamicus"_kinoshita_et_al._1958 "micrococcus glutamicus" kinoshita et al. 1958]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DR5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DR5 FirstGlance]. <br>
 </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cgl1119, cg1270 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1718 "Micrococcus glutamicus" Kinoshita et al. 1958])</td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cgl1119, cg1270 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1718 "Micrococcus glutamicus" Kinoshita et al. 1958])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dr5 OCA], [http://pdbe.org/3dr5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dr5 RCSB], [http://www.ebi.ac.uk/pdbsum/3dr5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dr5 ProSAT], [http://www.topsan.org/Proteins/NESGC/3dr5 TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dr5 OCA], [https://pdbe.org/3dr5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dr5 RCSB], [https://www.ebi.ac.uk/pdbsum/3dr5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dr5 ProSAT], [https://www.topsan.org/Proteins/NESGC/3dr5 TOPSAN]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
@@ Line 12: / Line 12: @@
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3dr5_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3dr5_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 21: / Line 21: @@
 </StructureSection>
 [[Category: Micrococcus glutamicus kinoshita et al. 1958]]
+[[Category: Large Structures]]
 [[Category: Acton, T B]]
 [[Category: Ciccosanti, C]]