Protein crosslinks: Difference between revisions
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*Example: Bacterial pilus adhesin [[2xi9]] has 2 isopeptide bonds (and 2 thioester bonds). Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | *Example: Bacterial pilus adhesin [[2xi9]] has 2 isopeptide bonds (and 2 thioester bonds). Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance]. | *Visualization (right click link, open in a new browser tab): [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance]. | ||
====Thioester Crosslinks==== | ====Thioester Crosslinks==== | ||
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*Example: Bacterial pilus adhesin [[2xi9]] has 2 thioester bonds (and 2 isopeptide bonds). Additional examples will be found at [[Thioester protein crosslinks]], and in the lower left panel of FirstGlance when this example is viewed. | *Example: Bacterial pilus adhesin [[2xi9]] has 2 thioester bonds (and 2 isopeptide bonds). Additional examples will be found at [[Thioester protein crosslinks]], and in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance]. | *Visualization (right click link, open in a new browser tab): [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance]. | ||
====Thioether Crosslinks==== | ====Thioether Crosslinks==== | ||
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*Example: [[6e87]] (sulfur-carbon distance 1.83 Å). | *Example: [[6e87]] (sulfur-carbon distance 1.83 Å). | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=6e87 View 6e87 in FirstGlance]. | *Visualization (right click link, open in a new browser tab): [https://firstglance.jmol.org/fg.htm?mol=6e87 View 6e87 in FirstGlance]. | ||
====Ester Crosslinks==== | ====Ester Crosslinks==== | ||
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*Example: Bacterial pilus repeat domains [[4mkm]] has 2 interchain Thr-Gln ester bonds. Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | *Example: Bacterial pilus repeat domains [[4mkm]] has 2 interchain Thr-Gln ester bonds. Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=4mkm View 4mkm in FirstGlance]. | *Visualization (right click link, open in a new browser tab): [https://firstglance.jmol.org/fg.htm?mol=4mkm View 4mkm in FirstGlance]. | ||
====Histidine-tyrosine protein crosslinks==== | ====Histidine-tyrosine protein crosslinks==== | ||
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*Example: [[6zx4]] was analyzed in depth and provided the first documented case. Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | *Example: [[6zx4]] was analyzed in depth and provided the first documented case. Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=6zx4 View 6zx4 in FirstGlance]. | *Visualization (right click link, open in a new browser tab): [https://firstglance.jmol.org/fg.htm?mol=6zx4 View 6zx4 in FirstGlance]. | ||
==Artificial Crosslinks== | ==Artificial Crosslinks== | ||