Protein crosslinks: Difference between revisions
Eric Martz (talk | contribs) |
Eric Martz (talk | contribs) No edit summary |
||
| Line 26: | Line 26: | ||
*Example: Bacterial pilus adhesin [[2xi9]] has 2 isopeptide bonds (and 2 thioester bonds). Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | *Example: Bacterial pilus adhesin [[2xi9]] has 2 isopeptide bonds (and 2 thioester bonds). Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance] | *Visualization: [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance]. | ||
====Thioester Crosslinks==== | ====Thioester Crosslinks==== | ||
| Line 40: | Line 40: | ||
*Example: Bacterial pilus adhesin [[2xi9]] has 2 thioester bonds (and 2 isopeptide bonds). Additional examples will be found at [[Thioester protein crosslinks]], and in the lower left panel of FirstGlance when this example is viewed. | *Example: Bacterial pilus adhesin [[2xi9]] has 2 thioester bonds (and 2 isopeptide bonds). Additional examples will be found at [[Thioester protein crosslinks]], and in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance] | *Visualization: [https://firstglance.jmol.org/fg.htm?mol=2xi9 View 2xi9 in FirstGlance]. | ||
====Thioether Crosslinks==== | ====Thioether Crosslinks==== | ||
| Line 48: | Line 48: | ||
*Example: [[6e87]] (sulfur-carbon distance 1.83 Å). | *Example: [[6e87]] (sulfur-carbon distance 1.83 Å). | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=6e87 View 6e87 in FirstGlance] | *Visualization: [https://firstglance.jmol.org/fg.htm?mol=6e87 View 6e87 in FirstGlance]. | ||
====Ester Crosslinks==== | ====Ester Crosslinks==== | ||
| Line 56: | Line 56: | ||
*Example: Bacterial pilus repeat domains [[4mkm]] has 2 interchain Thr-Gln ester bonds. Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | *Example: Bacterial pilus repeat domains [[4mkm]] has 2 interchain Thr-Gln ester bonds. Additional examples will be found in the lower left panel of FirstGlance when this example is viewed. | ||
*Visualization: [https://firstglance.jmol.org/fg.htm?mol=4mkm View 4mkm in FirstGlance] | *Visualization: [https://firstglance.jmol.org/fg.htm?mol=4mkm View 4mkm in FirstGlance]. | ||
====Histidine-tyrosine protein crosslinks==== | ====Histidine-tyrosine protein crosslinks==== | ||