MHC 3D structures: Difference between revisions
Michal Harel (talk | contribs) No edit summary |
Michal Harel (talk | contribs) No edit summary |
||
Line 16: | Line 16: | ||
**[[3kpn]], [[3kpo]] – hMHC I B + β-2-microglobulin + peptide<br /> | **[[3kpn]], [[3kpo]] – hMHC I B + β-2-microglobulin + peptide<br /> | ||
**[[3bev]], [[1kpr]], [[1k5n]], [[3nfn]], [[3mr9]], [[3mrb]], [[3mrc]], [[3mrd]], [[3mre]], [[3mrf]], [[3mrg]], [[3mrh]], [[3mri]], [[3mrj]], [[3mrk]], [[3mrl]], [[3mrm]], [[3mrn]], [[3mro]], [[3mrp]], [[3mrq]], [[3mrr]], [[3ox8]], [[3oxr]], [[3oxs]], [[2xpg]], [[3pwj]], [[3pwl]], [[3pwn]], [[3pwp]], [[2x70]], [[3o3a]], [[3o3b]], [[3o3d]], [[3o3e]], [[3lv3]], [[3ln4]], [[3ln5]], [[3myj]], [[3i6l]], [[3lkn]], [[3lko]], [[3lkp]], [[3lkq]], [[3lkr]], [[3lks]], [[3hpj]], [[3i6g]], [[3i6k]], [[3mgo]], [[3mgt]], [[3l3d]], [[3l3g]], [[3l3i]], [[3l3j]], [[3l3k]], [[2x4n]], [[2x4o]], [[2x4p]], [[2x4q]], [[2x4r]], [[2x4s]], [[2x4t]], [[2x4u]], [[3lka]], [[3h7b]], [[3kpl]], [[3kpm]], [[3kpn]], [[3kpo]], [[3kpp]], [[3kpq]], [[3kpr]], [[3kps]], [[3giv]], [[3hcv]], [[3d18]], [[3dtx]], [[3czf]], [[3fqn]], [[3fqr]], [[3fqt]], [[3fqu]], [[3fqw]], [[3fqx]], [[3d25]], [[3bvn]], [[3dx6]], [[3dx7]], [[3dx8]], [[3dxa]], [[3bo8]], [[3bp4]], [[3bp7]], [[3bgm]], [[3bh8]], [[3bh9]], [[3bhb]], [[3b3i]], [[3b6s]], [[2rfx]], [[3bze]], [[3bzf]], [[3bw9]], [[3bwa]], [[3c9n]], [[2v2w]], [[2v2x]], [[2gt9]], [[2gtw]], [[2gtz]], [[2guo]], [[2nw3]], [[2fyy]], [[2fz3]], [[2hn7]], [[2cik]], [[2git]], [[2hjk]], [[2hjl]], [[2h6p]], [[2d31]], [[2c7u]], [[2bck]], [[2a83]], [[2axf]], [[2axg]], [[2bvo]], [[2bvp]], [[2bvq]], [[1s8d]], [[1t1w]], [[1t1x]], [[1t1y]], [[1t1z]], [[1t20]], [[1t21]], [[1t22]], [[1s7q]], [[1zsd]], [[2bsr]], [[2bss]], [[2bst]], [[1zhk]], [[1zhl]], [[1tvb]], [[1tvh]], [[1xr8]], [[1xr9]], [[1w0v]], [[1w0w]], [[1xh3]], [[1uxs]], [[1uxw]], [[1s9w]], [[1s9x]], [[1s9y]], [[1q94]], [[1qvo]], [[1n2r]], [[1ogt]], [[1qew]], [[1jge]], [[1k5n]], [[1i7r]], [[1i7t]], [[1i7u]], [[1jf1]], [[1jht]], [[1i4f]], [[1e27]], [[1e28]], [[1i1y]], [[1i1f]], [[1qqd]], [[1mhe]], [[1b0g]], [[1a9b]], [[1a9e]], [[1a1m]], [[1a1n]], [[1a1o]], [[1tmc]], [[2clr]], [[1hhg]], [[1hhh]], [[1hhi]], [[1hhj]], [[1hhk]], [[1hsb]], [[1hsa]], [[3to2]], [[2vab]], [[6amt]], [[6at5]], [[6at9]], [[6bxp]], [[6d29]], [[6d2b]], [[6d2r]], [[6d2t]], [[6ei2]], [[6g3j]], [[6g3k]], [[6ggm]], [[6gh1]], [[6gh4]], [[6ghn]], [[6gl1]], [[6h6d]], [[6iex]], [[6j1v]], [[6j1w]], [[6joz]], [[6jp3]], [[6jtn]], [[6jto]], [[6jtp]], [[6l9n]], [[6mtl]], [[6nca]], [[6o4y]], [[6o4z]], [[6o51]], [[6o53]], [[6o9b]], [[6o9c]], [[6opd]], [[6p23]], [[6p27]], [[6p2c]], [[6p2f]], [[6p2s]], [[6pbh]], [[6ptb]], [[6pte]], [[6pyj]], [[6pyl]], [[6pyv]], [[6pyw]], [[6pz5]], [[6q3k]], [[6ss7]], [[6ss8]], [[6ss9]], [[6ssa]], [[6tdo]], [[6tdp]], [[6tdq]], [[6trn]], [[6uj8]], [[6ujo]], [[6ujq]], [[6uli]], [[6ulk]], [[6uzm]], [[6uzn]], [[6uzo]], [[6uzp]], [[6uzq]], [[6uzs]], [[6v2o]], [[6v2p]], [[6v2q]], [[6vb0]], [[6vb1]], [[6vb2]], [[6vb5]], [[6vb6]], [[6vb7]], [[6vb6]], [[6vb7]], [[6viu]], [[6vpz]], [[6vq2]], [[6vqd]], [[6vqe]], [[6vqy]], [[6vqz]], [[6vr1]], [[6vr5]], [[6xqa]], [[6y26]], [[6y27]], [[6y28]], [[6y29]], [[6y2a]], [[6y2b]], [[6z9v]], [[6z9w]], [[6z9x]], [[7alo]], [[7ji2]], [[7jyv]], [[7jyu]], [[7jyw]], [[7jyx]], [[7lgp]], [[7mj6]], [[7mj7]], [[7mj8]], [[7mj9]], [[7mja]], [[7nui]] - hMHC I α + β-2-microglobulin + peptide<br /> | **[[3bev]], [[1kpr]], [[2f53]], [[1k5n]], [[3nfn]], [[3mr9]], [[3mrb]], [[3mrc]], [[3mrd]], [[3mre]], [[3mrf]], [[3mrg]], [[3mrh]], [[3mri]], [[3mrj]], [[3mrk]], [[3mrl]], [[3mrm]], [[3mrn]], [[3mro]], [[3mrp]], [[3mrq]], [[3mrr]], [[3ox8]], [[3oxr]], [[3oxs]], [[2xpg]], [[3pwj]], [[3pwl]], [[3pwn]], [[3pwp]], [[2x70]], [[3o3a]], [[3o3b]], [[3o3d]], [[3o3e]], [[3lv3]], [[3ln4]], [[3ln5]], [[3myj]], [[3i6l]], [[3lkn]], [[3lko]], [[3lkp]], [[3lkq]], [[3lkr]], [[3lks]], [[3hpj]], [[3i6g]], [[3i6k]], [[3mgo]], [[3mgt]], [[3l3d]], [[3l3g]], [[3l3i]], [[3l3j]], [[3l3k]], [[2x4n]], [[2x4o]], [[2x4p]], [[2x4q]], [[2x4r]], [[2x4s]], [[2x4t]], [[2x4u]], [[3lka]], [[3h7b]], [[3kpl]], [[3kpm]], [[3kpn]], [[3kpo]], [[3kpp]], [[3kpq]], [[3kpr]], [[3kps]], [[3giv]], [[3hcv]], [[3d18]], [[3dtx]], [[3czf]], [[3fqn]], [[3fqr]], [[3fqt]], [[3fqu]], [[3fqw]], [[3fqx]], [[3d25]], [[3bvn]], [[3dx6]], [[3dx7]], [[3dx8]], [[3dxa]], [[3bo8]], [[3bp4]], [[3bp7]], [[3bgm]], [[3bh8]], [[3bh9]], [[3bhb]], [[3b3i]], [[3b6s]], [[2rfx]], [[3bze]], [[3bzf]], [[3bw9]], [[3bwa]], [[3c9n]], [[2v2w]], [[2v2x]], [[2gt9]], [[2gtw]], [[2gtz]], [[2guo]], [[2nw3]], [[2fyy]], [[2fz3]], [[2hn7]], [[2cik]], [[2git]], [[2hjk]], [[2hjl]], [[2h6p]], [[2d31]], [[2c7u]], [[2bck]], [[2a83]], [[2axf]], [[2axg]], [[2bvo]], [[2bvp]], [[2bvq]], [[1s8d]], [[1t1w]], [[1t1x]], [[1t1y]], [[1t1z]], [[1t20]], [[1t21]], [[1t22]], [[1s7q]], [[1zsd]], [[2bsr]], [[2bss]], [[2bst]], [[1zhk]], [[1zhl]], [[1tvb]], [[1tvh]], [[1xr8]], [[1xr9]], [[1w0v]], [[1w0w]], [[1xh3]], [[1uxs]], [[1uxw]], [[1s9w]], [[1s9x]], [[1s9y]], [[1q94]], [[1qvo]], [[1n2r]], [[1ogt]], [[1qew]], [[1jge]], [[1k5n]], [[1i7r]], [[1i7t]], [[1i7u]], [[1jf1]], [[1jht]], [[1i4f]], [[1e27]], [[1e28]], [[1i1y]], [[1i1f]], [[1qqd]], [[1mhe]], [[1b0g]], [[1a9b]], [[1a9e]], [[1a1m]], [[1a1n]], [[1a1o]], [[1tmc]], [[2clr]], [[1hhg]], [[1hhh]], [[1hhi]], [[1hhj]], [[1hhk]], [[1hsb]], [[1hsa]], [[3to2]], [[2vab]], [[6amt]], [[6at5]], [[6at9]], [[6bxp]], [[6d29]], [[6d2b]], [[6d2r]], [[6d2t]], [[6ei2]], [[6g3j]], [[6g3k]], [[6ggm]], [[6gh1]], [[6gh4]], [[6ghn]], [[6gl1]], [[6h6d]], [[6iex]], [[6j1v]], [[6j1w]], [[6joz]], [[6jp3]], [[6jtn]], [[6jto]], [[6jtp]], [[6l9n]], [[6mtl]], [[6nca]], [[6o4y]], [[6o4z]], [[6o51]], [[6o53]], [[6o9b]], [[6o9c]], [[6opd]], [[6p23]], [[6p27]], [[6p2c]], [[6p2f]], [[6p2s]], [[6pbh]], [[6ptb]], [[6pte]], [[6pyj]], [[6pyl]], [[6pyv]], [[6pyw]], [[6pz5]], [[6q3k]], [[6ss7]], [[6ss8]], [[6ss9]], [[6ssa]], [[6tdo]], [[6tdp]], [[6tdq]], [[6trn]], [[6uj8]], [[6ujo]], [[6ujq]], [[6uli]], [[6ulk]], [[6uzm]], [[6uzn]], [[6uzo]], [[6uzp]], [[6uzq]], [[6uzs]], [[6v2o]], [[6v2p]], [[6v2q]], [[6vb0]], [[6vb1]], [[6vb2]], [[6vb5]], [[6vb6]], [[6vb7]], [[6vb6]], [[6vb7]], [[6viu]], [[6vpz]], [[6vq2]], [[6vqd]], [[6vqe]], [[6vqy]], [[6vqz]], [[6vr1]], [[6vr5]], [[6xqa]], [[6y26]], [[6y27]], [[6y28]], [[6y29]], [[6y2a]], [[6y2b]], [[6z9v]], [[6z9w]], [[6z9x]], [[7alo]], [[7ji2]], [[7jyv]], [[7jyu]], [[7jyw]], [[7jyx]], [[7lgp]], [[7mj6]], [[7mj7]], [[7mj8]], [[7mj9]], [[7mja]], [[7nui]] - hMHC I α + β-2-microglobulin + peptide<br /> | ||
**[[1ktl]], [[3kww]], [[3h9h]], [[3ixa]], [[3gso]], [[3gsq]], [[3gsr]], [[3gsu]], [[3gsv]], [[3gsw]], [[3gsx]], [[3ft2]], [[3ft3]], [[3ft4]], [[2av1]], [[2av7]], [[1cg9]], [[1m05]], [[1m6o]], [[1kpr]], [[1ktl]], [[6iwh]] - hMHC I α (mutant) + β-2-microglobulin + peptide<br /> | **[[1ktl]], [[3kww]], [[3h9h]], [[3ixa]], [[3gso]], [[3gsq]], [[3gsr]], [[3gsu]], [[3gsv]], [[3gsw]], [[3gsx]], [[3ft2]], [[3ft3]], [[3ft4]], [[2av1]], [[2av7]], [[1cg9]], [[1m05]], [[1m6o]], [[1kpr]], [[1ktl]], [[6iwh]] - hMHC I α (mutant) + β-2-microglobulin + peptide<br /> | ||
**[[6mpp]] - hMHC I + β-2-microglobulin + peptide – NMR<br /> | **[[6mpp]] - hMHC I + β-2-microglobulin + peptide – NMR<br /> | ||
Line 51: | Line 51: | ||
*MHC I quaternary complex | *MHC I quaternary complex | ||
**[[3qdg]], [[3qdj]], [[3qdm]], [[3qeq]], [[3mv7]], [[3mv9]], [[3h9s]], [[3gsn]], [[3d39]], [[3d3v]], [[3ffc]], [[2vlj]], [[2vlk]], [[2vll]], [[2vlr]], [[2j8u]], [[2p5e]], [[2p5w]], [[2pye]], [[2gj6]], [[2f54]], [[2esv]], [[2bnq]], [[2bnr]], [[1lp9]], [[1oga]], [[1mi5]], [[1qrn]] - hMHC I α + T cell receptor + β-2-microglobulin + peptide<br /> | **[[3qdg]], [[3qdj]], [[3qdm]], [[3qeq]], [[3mv7]], [[3mv9]], [[3h9s]], [[3gsn]], [[3d39]], [[3d3v]], [[3ffc]], [[2vlj]], [[2vlk]], [[2vll]], [[2vlr]], [[2j8u]], [[2p5e]], [[2p5w]], [[2pye]], [[2gj6]], [[2f54]], [[2esv]], [[2bnq]], [[2bnr]], [[1lp9]], [[1oga]], [[1mi5]], [[1qrn]], [[6amu]], [[6avf]], [[6avg]], [[6bj2]], [[6bj3]], [[6bj8]], [[6d78]], [[6dkp]], [[6g9q]], [[6mt3]], [[6mt4]], [[6mt5]], [[6mt6]], [[6mtm]], [[6pue]], [[6puf]], [[6pug]], [[6pui]], [[6puj]], [[6puk]], [[6pul]], [[6pum]], [[6pvc]], [[6pvd]], ]]6px6]], [[6q3s]], [[6r2l]], [[6rsy]], [[6tro]], [[6uk2]], [[6uk4]], [[6ulr]], [[6uon]], [[6uz1]], [[6vm7]], [[6vm8]], [[6vm9]], [[6vqo]], [[6vma]], [[6vmc]], [[6vmx]], [[6vrm]], [[6vrn]], [[7lfk]], [[7lfl]], [[7lfm]], [[7n1e]], [[7n1f]], [[7n6e]], [[7rtr]] - hMHC I α + T cell receptor + β-2-microglobulin + peptide<br /> | ||
**[[3kxf]], [[3mv8]], [[2jcc]], [[2uwe]] - hMHC I α (mutant) + T cell receptor + β-2-microglobulin + peptide<br /> | **[[3kxf]], [[3mv8]], [[2jcc]], [[2uwe]] - hMHC I α (mutant) + T cell receptor + β-2-microglobulin + peptide<br /> | ||
**[[2f53]] - hMHC I α + T cell receptor + β-2-microglobulin (mutant) + peptide<br /> | **[[2f53]] - hMHC I α + T cell receptor + β-2-microglobulin (mutant) + peptide<br /> | ||
**[[1p7q]], [[1im9]] - hMHC I α + leukocyte immunoglobulin-like receptor + β-2-microglobulin + peptide<br /> | **[[1p7q]], [[1im9]], [[6ewc]] - hMHC I α + leukocyte immunoglobulin-like receptor + β-2-microglobulin + peptide<br /> | ||
**[[6v3j]], [[7k81]] - hMHC I α + KIR3DL1 + -2-microglobulin + peptide<br /> | |||
**[[6pag]] - hMHC I α + KIR2DL3 + -2-microglobulin + peptide<br /> | |||
**[[6aee]], [[6k60]] - hMHC I α + LIR-1 + -2-microglobulin + peptide<br /> | |||
**[[6ewo]] - hMHC I α + LIR-1 + synemin + -2-microglobulin + peptide<br /> | |||
**[[6ewa]] - hMHC I α + LIR-1 + polyprotein + -2-microglobulin <br /> | |||
**[[6eny]] - hMHC I α + calreticulin + protein disulfide isomerase + tapasin + -2-microglobulin – Cryo EM<br /> | |||
**[[2dyp]] - hMHC I α (mutant) + leukocyte immunoglobulin-like receptor + β-2-microglobulin + peptide<br /> | **[[2dyp]] - hMHC I α (mutant) + leukocyte immunoglobulin-like receptor + β-2-microglobulin + peptide<br /> | ||
**[[3qzw]], [[3dmm]], [[1bqh]], [[1akj]] - hMHC I α + β-2-microglobulin + CD8 α + peptide<br /> | **[[3qzw]], [[3dmm]], [[1bqh]], [[1akj]] - hMHC I α + β-2-microglobulin + CD8 α + peptide<br /> | ||
**[[1im3]] - hMHC I α + β-2-microglobulin + cytomegalovirus protein US2 + peptide<br /> | **[[1im3]] - hMHC I α + β-2-microglobulin + cytomegalovirus protein US2 + peptide<br /> | ||
**[[3cii]], [[3cdg]] - hMHC I α + β-2-microglobulin + CD94 ectodomain + NKG2A/NKG2B integral membrane protein + peptide<br /> | **[[3cii]], [[3cdg]] - hMHC I α + β-2-microglobulin + CD94 ectodomain + NKG2A/NKG2B integral membrane protein + peptide<br /> | ||
**[[3hae]], [[3gjf]], [[3cvh]], [[1w72]] - hMHC I α + β-2-microglobulin + antibody + peptide<br /> | **[[3hae]], [[3gjf]], [[3cvh]], [[1w72]], [[6uj9]], [[6w51]] - hMHC I α + β-2-microglobulin + antibody + peptide<br /> | ||
**[[1g6r]], [[2ckb]], [[3pqy]], [[2z31]], [[1nam]], [[1mwa]], [[1g6r]], [[2ckb]] - mMHC I + T cell receptor + β-2-microglobulin + peptide<br /> | **[[1g6r]], [[2ckb]], [[3pqy]], [[2z31]], [[1nam]], [[1mwa]], [[1g6r]], [[2ckb]], [[7jwl]] - mMHC I + T cell receptor + β-2-microglobulin + peptide<br /> | ||
**[[2oi9]] - mMHC I (mutant) + T cell receptor + β-2-microglobulin + peptide<br /> | **[[2oi9]] - mMHC I (mutant) + T cell receptor + β-2-microglobulin + peptide<br /> | ||
**[[1p1z]], [[1p4l]], [[1qo3]] - mMHC I + β-2-microglobulin + natural killer cell receptor LY49C + peptide<br /> | **[[1p1z]], [[1p4l]], [[1qo3]] - mMHC I + β-2-microglobulin + natural killer cell receptor LY49C + peptide<br /> | ||
Line 71: | Line 77: | ||
**[[3cup]], [[2p24]], [[1lnu]], [[1fng]] - mMHC II α+β<br /> | **[[3cup]], [[2p24]], [[1lnu]], [[1fng]] - mMHC II α+β<br /> | ||
**[[1fne]] - mMHC II α+β (mutant) <br /> | **[[1fne]] - mMHC II α+β (mutant) <br /> | ||
**[[3lqz]] - hMHC II α+β DP2 | **[[3lqz]] - hMHC II α+β DP2<br /> | ||
**[[6t3y]] - cMHC II α+β<br /> | |||
*MHC II binary complex | *MHC II binary complex | ||
Line 77: | Line 84: | ||
**[[1h15]] - hMHC II α+β + DNA polymerase peptide<br /> | **[[1h15]] - hMHC II α+β + DNA polymerase peptide<br /> | ||
**[[1fv1]] - hMHC II α+β + myelin basic protein<br /> | **[[1fv1]] - hMHC II α+β + myelin basic protein<br /> | ||
**[[3o6f]], [[2wbj]] - hMHC II α+β + T cell receptor<br /> | **[[3o6f]], [[2wbj]], [[6mnn]], [[6mno]] - hMHC II α+β + T cell receptor<br /> | ||
**[[3l6f]], [[3c5j]], [[2q6w]], [[2fse]], [[1t5w]], [[1s9v]], [[1uvq]], [[1h15]], [[1fv1]] – hMHC II α+β + peptide<br /> | **[[3l6f]], [[3c5j]], [[2q6w]], [[2fse]], [[1t5w]], [[1s9v]], [[1uvq]], [[1h15]], [[1fv1]], [[6atf]], [[6atz]], [[6bij]], [[6bil]], [[6bin]], [[6biv]], [[6blq]], [[6dig]], [[6nix]], [[6qzc]], [[6qzd]], [[6u3m]], [[6zwa]], [[7kei]] – hMHC II α+β + peptide<br /> | ||
**[[1dlh]] - hMHC II α+β + enterotoxin<br /> | **[[1dlh]] - hMHC II α+β + enterotoxin<br /> | ||
**[[3c5z]], [[3c60]], [[3c6l]] - mMHC II α+β + T cell receptor<br /> | **[[3c5z]], [[3c60]], [[3c6l]], [[6dfs]], [[6dfw]], [[6mkd]], [[6mkr]], [[6py2]] - mMHC II α+β + T cell receptor<br /> | ||
**[[1r5v]], [[1k2d]], [[1muj]], [[1kt2]], [[1ktd]], [[1f3j]], [[1es0]], [[1iak]], [[1iea]], [[1ieb]], [[1f3j]] - mMHC II α+β + peptide<br /> | **[[1r5v]], [[1k2d]], [[1muj]], [[1kt2]], [[1ktd]], [[1f3j]], [[1es0]], [[1iak]], [[1iea]], [[1ieb]], [[1f3j]] - mMHC II α+β + peptide<br /> | ||
**[[1aqd]] - mMHC II α+β + MHC I peptide<br /> | **[[1aqd]] - mMHC II α+β + MHC I peptide<br /> | ||
**[[1r5w]], [[1i3r]] - mMHC II α+β (mutant) + peptide<br /> | **[[1r5w]], [[1i3r]] - mMHC II α+β (mutant) + peptide<br /> | ||
**[[6kvm]] – cMHC II α+β + peptide<br /> | |||
*MHC II ternary complex | *MHC II ternary complex |