1fdr: Difference between revisions

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[[Image:1fdr.gif|left|200px]]
[[Image:1fdr.gif|left|200px]]


{{Structure
<!--
|PDB= 1fdr |SIZE=350|CAPTION= <scene name='initialview01'>1fdr</scene>, resolution 1.70&Aring;
The line below this paragraph, containing "STRUCTURE_1fdr", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
or leave the SCENE parameter empty for the default display.
|GENE= FPR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
-->
|DOMAIN=
{{STRUCTURE_1fdr| PDB=1fdr  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1fdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fdr OCA], [http://www.ebi.ac.uk/pdbsum/1fdr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1fdr RCSB]</span>
}}


'''FLAVODOXIN REDUCTASE FROM E. COLI'''
'''FLAVODOXIN REDUCTASE FROM E. COLI'''
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The three-dimensional structure of flavodoxin reductase from Escherichia coli at 1.7 A resolution., Ingelman M, Bianchi V, Eklund H, J Mol Biol. 1997 Apr 25;268(1):147-57. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9149148 9149148]
The three-dimensional structure of flavodoxin reductase from Escherichia coli at 1.7 A resolution., Ingelman M, Bianchi V, Eklund H, J Mol Biol. 1997 Apr 25;268(1):147-57. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9149148 9149148]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Ferredoxin--NADP(+) reductase]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Bianchi, V.]]
[[Category: Bianchi, V.]]
[[Category: Eklund, H.]]
[[Category: Eklund, H.]]
[[Category: Ingelman, M.]]
[[Category: Ingelman, M.]]
[[Category: ferredoxin reductase]]
[[Category: Ferredoxin reductase]]
[[Category: flavin]]
[[Category: Flavin]]
[[Category: flavodoxin reductase]]
[[Category: Flavodoxin reductase]]
[[Category: flavoprotein]]
[[Category: Flavoprotein]]
[[Category: oxidoreductase]]
[[Category: Oxidoreductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 16:12:42 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:21:00 2008''

Revision as of 16:12, 2 May 2008

File:1fdr.gif

Template:STRUCTURE 1fdr

FLAVODOXIN REDUCTASE FROM E. COLI


OverviewOverview

Flavodoxin reductase from Escherichia coli is an FAD-containing oxidoreductase that transports electrons between flavodoxin or ferredoxin and NADPH. Together with flavodoxin, the enzyme is involved in the reductive activation of three E. coli enzymes: cobalamin-dependent methionine synthase, pyruvate formate lyase and anaerobic ribonucleotide reductase. An additional function for the oxidoreductase appears to be to protect the bacteria against oxygen radicals. The three-dimensional structure of flavodoxin reductase has been solved by multiple isomorphous replacement, and has been refined at 1.7 A to an R-value of 18.4% and Rfree 24.8%. The monomeric molecule contains one beta-sandwich FAD domain and an alpha/beta NADP domain. The overall structure is similar to other reductases of the NADP-ferredoxin reductase family in spite of the low sequence similarities within the family. Flavodoxin reductase lacks the loop which is involved in the binding of the adenosine moiety of FAD in other FAD binding enzymes of the superfamily but is missing in the FMN binding phthalate dioxygenase reductase. Instead of this loop, the adenine interacts with an extra tryptophan at the C terminus. The FAD in flavodoxin reductase has an unusual bent conformation with a hydrogen bond between the adenine and the isoalloxazine. This is probably the cause of the unusual spectrum of the enzyme. There is a pronounced cleft close to the isoalloxazine that appears to be well suited for binding of flavodoxin/ferredoxin. Two extra short strands of the NADP-binding domain probably act as an anchor point for the binding of flavodoxin.

About this StructureAbout this Structure

1FDR is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

ReferenceReference

The three-dimensional structure of flavodoxin reductase from Escherichia coli at 1.7 A resolution., Ingelman M, Bianchi V, Eklund H, J Mol Biol. 1997 Apr 25;268(1):147-57. PMID:9149148 Page seeded by OCA on Fri May 2 16:12:42 2008

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