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==Crystal structure of the N-terminal domain of UPF0209 protein yfcK from Escherichia coli O157:H7==
==Crystal structure of the N-terminal domain of UPF0209 protein yfcK from Escherichia coli O157:H7==
<StructureSection load='2qy6' size='340' side='right' caption='[[2qy6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2qy6' size='340' side='right'caption='[[2qy6]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2qy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eco57 Eco57]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QY6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QY6 FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QY6 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yfcK, Z3587, ECs3208 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83334 ECO57])</td></tr>
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qy6 OCA], [https://pdbe.org/2qy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qy6 RCSB], [https://www.ebi.ac.uk/pdbsum/2qy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qy6 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qy6 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qy6 OCA], [http://pdbe.org/2qy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qy6 RCSB], [http://www.ebi.ac.uk/pdbsum/2qy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qy6 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2qy6 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/MNMC_ECO57 MNMC_ECO57]] Catalyzes the last two steps in the biosynthesis of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34.[HAMAP-Rule:MF_01102]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Eco57]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Almo SC]]
[[Category: Bain, K T]]
[[Category: Bain KT]]
[[Category: Bonanno, J B]]
[[Category: Bonanno JB]]
[[Category: Burley, S K]]
[[Category: Burley SK]]
[[Category: Dickey, M]]
[[Category: Dickey M]]
[[Category: Eberle, M]]
[[Category: Eberle M]]
[[Category: Structural genomic]]
[[Category: Ozyurt S]]
[[Category: Ozyurt, S]]
[[Category: Sauder JM]]
[[Category: Sauder, J M]]
[[Category: Smith D]]
[[Category: Smith, D]]
[[Category: Wasserman S]]
[[Category: Wasserman, S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Revision as of 07:08, 2 July 2021

Crystal structure of the N-terminal domain of UPF0209 protein yfcK from Escherichia coli O157:H7Crystal structure of the N-terminal domain of UPF0209 protein yfcK from Escherichia coli O157:H7

Structural highlights

Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

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OCA
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