2p3e: Difference between revisions

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==Crystal structure of AQ1208 from Aquifex aeolicus==
==Crystal structure of AQ1208 from Aquifex aeolicus==
<StructureSection load='2p3e' size='340' side='right' caption='[[2p3e]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
<StructureSection load='2p3e' size='340' side='right'caption='[[2p3e]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2p3e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P3E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P3E FirstGlance]. <br>
<table><tr><td colspan='2'>[[2p3e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P3E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P3E FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1twi|1twi]]</td></tr>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1twi|1twi]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysA, aq_1208 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysA, aq_1208 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diaminopimelate_decarboxylase Diaminopimelate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.20 4.1.1.20] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Diaminopimelate_decarboxylase Diaminopimelate decarboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.20 4.1.1.20] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p3e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3e OCA], [http://pdbe.org/2p3e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p3e RCSB], [http://www.ebi.ac.uk/pdbsum/2p3e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2p3e ProSAT], [http://www.topsan.org/Proteins/RSGI/2p3e TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p3e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p3e OCA], [https://pdbe.org/2p3e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p3e RCSB], [https://www.ebi.ac.uk/pdbsum/2p3e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p3e ProSAT], [https://www.topsan.org/Proteins/RSGI/2p3e TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/DCDA_AQUAE DCDA_AQUAE]] Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine (By similarity).[HAMAP-Rule:MF_02120]  
[[https://www.uniprot.org/uniprot/DCDA_AQUAE DCDA_AQUAE]] Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine (By similarity).[HAMAP-Rule:MF_02120]  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Aquae]]
[[Category: Aquae]]
[[Category: Diaminopimelate decarboxylase]]
[[Category: Diaminopimelate decarboxylase]]
[[Category: Large Structures]]
[[Category: Chen, L]]
[[Category: Chen, L]]
[[Category: Ebihara, A]]
[[Category: Ebihara, A]]

Revision as of 18:15, 17 June 2021

Crystal structure of AQ1208 from Aquifex aeolicusCrystal structure of AQ1208 from Aquifex aeolicus

Structural highlights

2p3e is a 2 chain structure with sequence from Aquae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:lysA, aq_1208 (AQUAE)
Activity:Diaminopimelate decarboxylase, with EC number 4.1.1.20
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[DCDA_AQUAE] Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine (By similarity).[HAMAP-Rule:MF_02120]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2p3e, resolution 1.99Å

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