7bbx: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 11: Line 11:
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/A0A1D3FXY0_NEIGO A0A1D3FXY0_NEIGO]] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.[ARBA:ARBA00003518][HAMAP-Rule:MF_00493]  
[[https://www.uniprot.org/uniprot/A0A1D3FXY0_NEIGO A0A1D3FXY0_NEIGO]] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.[ARBA:ARBA00003518][HAMAP-Rule:MF_00493]  
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Disulfide bonds between cysteine residues are important post-translational modifications in proteins that have critical roles for protein structure and stability, as redox-active catalytic groups in enzymes or allosteric redox switches that govern protein function(1-4). In addition to forming disulfide bridges, cysteine residues are susceptible to oxidation by reactive oxygen species, and are thus central not only to the scavenging of these but also to cellular signalling and communication in biological as well as pathological contexts(5,6). Oxidized cysteine species are highly reactive and may form covalent conjugates with, for example, tyrosines in the active sites of some redox enzymes(7,8). However, to our knowledge, regulatory switches with covalent crosslinks other than disulfides have not previously been demonstrated. Here we report the discovery of a covalent crosslink between a cysteine and a lysine residue with a NOS bridge that serves as an allosteric redox switch in the transaldolase enzyme of Neisseria gonorrhoeae, the pathogen that causes gonorrhoea. X-ray structure analysis of the protein in the oxidized and reduced state reveals a loaded-spring mechanism that involves a structural relaxation upon redox activation, which is propagated from the allosteric redox switch at the protein surface to the active site in the protein interior. This relaxation leads to a reconfiguration of key catalytic residues and elicits an increase in enzymatic activity of several orders of magnitude. The redox switch is highly conserved in related transaldolases from other members of the Neisseriaceae; for example, it is present in the transaldolase of Neisseria meningitides (a pathogen that is the primary cause of meningitis and septicaemia in children). We surveyed the Protein Data Bank and found that the NOS bridge exists in diverse protein families across all domains of life (including Homo sapiens) and that it is often located at catalytic or regulatory hotspots. Our findings will inform strategies for the design of proteins and peptides, as well as the development of new classes of drugs and antibodies that target the lysine-cysteine redox switch(9,10).
A lysine-cysteine redox switch with an NOS bridge regulates enzyme function.,Wensien M, von Pappenheim FR, Funk LM, Kloskowski P, Curth U, Diederichsen U, Uranga J, Ye J, Fang P, Pan KT, Urlaub H, Mata RA, Sautner V, Tittmann K Nature. 2021 May 5. pii: 10.1038/s41586-021-03513-3. doi:, 10.1038/s41586-021-03513-3. PMID:33953398<ref>PMID:33953398</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 7bbx" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Revision as of 13:22, 19 May 2021

Neisseria gonorrhoeae transaldolase, variant K8ANeisseria gonorrhoeae transaldolase, variant K8A

Structural highlights

7bbx is a 1 chain structure with sequence from "diplococcus_gonorrhoeae"_(zopf_1885)_lehmann_and_neumann_1896 "diplococcus gonorrhoeae" (zopf 1885) lehmann and neumann 1896. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Gene:tal, E8M68_10680, F9Z35_1423, TUM15744_11190, TUM15745_13730, TUM15746_13410, TUM15747_14120, TUM15749_15370, TUM15750_11410, TUM15751_15520, TUM15759_11670, TUM15760_12360, TUM15761_09930, TUM15764_14310, TUM15765_13050, TUM15766_06460, TUM15768_14740, TUM15770_09320, TUM15771_08190, TUM15772_10900, TUM15774_13280, TUM15776_12130, TUM15780_14920, TUM15781_07470, TUM15782_07520, TUM15784_12210, TUM15785_13660, TUM15786_07850, TUM15787_13260, TUM15789_13310, TUM15790_01750, TUM15791_13450, TUM15792_03840, TUM15793_14160, TUM15796_12040, TUM15797_11040, TUM15798_01870, WHOO_01512, WHOO_01712 ("Diplococcus gonorrhoeae" (Zopf 1885) Lehmann and Neumann 1896)
Activity:Transaldolase, with EC number 2.2.1.2
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[A0A1D3FXY0_NEIGO] Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.[ARBA:ARBA00003518][HAMAP-Rule:MF_00493]

Publication Abstract from PubMed

Disulfide bonds between cysteine residues are important post-translational modifications in proteins that have critical roles for protein structure and stability, as redox-active catalytic groups in enzymes or allosteric redox switches that govern protein function(1-4). In addition to forming disulfide bridges, cysteine residues are susceptible to oxidation by reactive oxygen species, and are thus central not only to the scavenging of these but also to cellular signalling and communication in biological as well as pathological contexts(5,6). Oxidized cysteine species are highly reactive and may form covalent conjugates with, for example, tyrosines in the active sites of some redox enzymes(7,8). However, to our knowledge, regulatory switches with covalent crosslinks other than disulfides have not previously been demonstrated. Here we report the discovery of a covalent crosslink between a cysteine and a lysine residue with a NOS bridge that serves as an allosteric redox switch in the transaldolase enzyme of Neisseria gonorrhoeae, the pathogen that causes gonorrhoea. X-ray structure analysis of the protein in the oxidized and reduced state reveals a loaded-spring mechanism that involves a structural relaxation upon redox activation, which is propagated from the allosteric redox switch at the protein surface to the active site in the protein interior. This relaxation leads to a reconfiguration of key catalytic residues and elicits an increase in enzymatic activity of several orders of magnitude. The redox switch is highly conserved in related transaldolases from other members of the Neisseriaceae; for example, it is present in the transaldolase of Neisseria meningitides (a pathogen that is the primary cause of meningitis and septicaemia in children). We surveyed the Protein Data Bank and found that the NOS bridge exists in diverse protein families across all domains of life (including Homo sapiens) and that it is often located at catalytic or regulatory hotspots. Our findings will inform strategies for the design of proteins and peptides, as well as the development of new classes of drugs and antibodies that target the lysine-cysteine redox switch(9,10).

A lysine-cysteine redox switch with an NOS bridge regulates enzyme function.,Wensien M, von Pappenheim FR, Funk LM, Kloskowski P, Curth U, Diederichsen U, Uranga J, Ye J, Fang P, Pan KT, Urlaub H, Mata RA, Sautner V, Tittmann K Nature. 2021 May 5. pii: 10.1038/s41586-021-03513-3. doi:, 10.1038/s41586-021-03513-3. PMID:33953398[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Wensien M, von Pappenheim FR, Funk LM, Kloskowski P, Curth U, Diederichsen U, Uranga J, Ye J, Fang P, Pan KT, Urlaub H, Mata RA, Sautner V, Tittmann K. A lysine-cysteine redox switch with an NOS bridge regulates enzyme function. Nature. 2021 May 5. pii: 10.1038/s41586-021-03513-3. doi:, 10.1038/s41586-021-03513-3. PMID:33953398 doi:http://dx.doi.org/10.1038/s41586-021-03513-3

7bbx, resolution 0.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA