2dpd: Difference between revisions

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 ==Crystal structure of the Replication Termination Protein in complex with a pseudosymmetric B-site==
-<StructureSection load='2dpd' size='340' side='right' caption='[[2dpd]], [[Resolution|resolution]] 3.17&Aring;' scene=''>
+<StructureSection load='2dpd' size='340' side='right'caption='[[2dpd]], [[Resolution|resolution]] 3.17&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2dpd]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DPD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2dpd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DPD FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1f4k|1f4k]], [[1bm9|1bm9]], [[1j0r|1j0r]]</td></tr>
+</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1f4k|1f4k]], [[1bm9|1bm9]], [[1j0r|1j0r]]</div></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rtp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rtp ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpd OCA], [http://pdbe.org/2dpd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dpd RCSB], [http://www.ebi.ac.uk/pdbsum/2dpd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpd ProSAT]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpd OCA], [https://pdbe.org/2dpd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dpd RCSB], [https://www.ebi.ac.uk/pdbsum/2dpd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpd ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU]] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.
+[[https://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU]] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.
 ==See Also==
@@ Line 16: / Line 16: @@
 </StructureSection>
 [[Category: Vibrio subtilis ehrenberg 1835]]
+[[Category: Large Structures]]
 [[Category: Vivian, J P]]
 [[Category: Wilce, J]]