2b8n: Difference between revisions

← Older edit Newer edit →

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==Crystal structure of Glycerate kinase (EC 2.7.1.31) (tm1585) from THERMOTOGA MARITIMA at 2.70 A resolution==
-<StructureSection load='2b8n' size='340' side='right' caption='[[2b8n]], [[Resolution|resolution]] 2.53&Aring;' scene=''>
+<StructureSection load='2b8n' size='340' side='right'caption='[[2b8n]], [[Resolution|resolution]] 2.53&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2b8n]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thema Thema]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1o0u 1o0u]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B8N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2B8N FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2b8n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thema Thema]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1o0u 1o0u]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B8N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B8N FirstGlance]. <br>
 </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tm1585 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr>
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tm1585 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycerate_3-kinase Glycerate 3-kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.31 2.7.1.31] </span></td></tr>
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Glycerate_3-kinase Glycerate 3-kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.31 2.7.1.31] </span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2b8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b8n OCA], [http://pdbe.org/2b8n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2b8n RCSB], [http://www.ebi.ac.uk/pdbsum/2b8n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2b8n ProSAT], [http://www.topsan.org/Proteins/JCSG/2b8n TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b8n OCA], [https://pdbe.org/2b8n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b8n RCSB], [https://www.ebi.ac.uk/pdbsum/2b8n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b8n ProSAT], [https://www.topsan.org/Proteins/JCSG/2b8n TOPSAN]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/GCK_THEMA GCK_THEMA]] Involved in the degradation of serine via 3-hydroxypyruvate. Catalyzes the ATP-dependent phosphorylation of D-glycerate to 2-phosphoglycerate.<ref>PMID:18156253</ref>
+[[https://www.uniprot.org/uniprot/GCK_THEMA GCK_THEMA]] Involved in the degradation of serine via 3-hydroxypyruvate. Catalyzes the ATP-dependent phosphorylation of D-glycerate to 2-phosphoglycerate.<ref>PMID:18156253</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 29: / Line 29: @@
 </StructureSection>
 [[Category: Glycerate 3-kinase]]
+[[Category: Large Structures]]
 [[Category: Thema]]
 [[Category: Structural genomic]]