Proteopedia:DIY:Macros: Difference between revisions

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Wayne Decatur (talk | contribs)
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Wayne Decatur (talk | contribs)
Editor, widgeteditor
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m try separate buttons
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</pre>
</pre>


 
The <code><nowiki>bobble()</nowiki></code> part triggers the action. The <code><nowiki>exit</nowiki></code> ends the looping bobble.</br>
You can try the result here:
You can try the result here:


Line 36: Line 36:
spin off;
spin off;
script /mc/ktheis.spt;
script /mc/ktheis.spt;
bobble(); delay 5.0; exit;
if (~bobble); ~bobble=false; exit; else; bobble(); ~bobble=true; endif;
</script>
</script>
  <text>Toggle Bobble on/off</text>
  <text>Toggle Bobble on/off</text>
Line 42: Line 42:
</jmol>
</jmol>


The <code><nowiki>bobble()</nowiki></code> part triggers the action. The <code><nowiki>exit</nowiki></code> ends the looping bobble.
'''Doesn't seem to stop!?!?'''
 
<jmol>
  <jmolButton>
    <script>script /mc/ktheis.spt;bobble()</script>
    <text>Start Bobbling</text>
  </jmolButton>
</jmol> <jmol>
  <jmolButton>
    <script>exit</script>
    <text>Stop Bobble</text>
  </jmolButton>
</jmol>
 
 


This example shows how to specify an item or items to act on by passing in a parameter.
This example shows how to specify an item or items to act on by passing in a parameter.

Revision as of 05:41, 4 January 2021

Macros as a tool

Macros can be used in Proteopedia pages to call commonly used JSmol code. Macro functions can take parameters so that the code is general but can act on the specified item or items. Additional macros can be made.

This page is meant to be a resource for finding and using macros.


Defined Macros

The currently listing of defined macro functions can be found at Proteopedia:Macros.

Using Macros

Integrating macro use into JSmol code is straightforward.

This example doesn't require any parameter to act. It causes the structure shown to 'bobble()'. 

<jmol>
<jmolLink>
<script>
script /mc/ktheis.spt;
if (~bobble); ~bobble=false; exit; else; bobble(); ~bobble=true; endif;
</script>
 <text>Toggle Bobble on/off</text>
 </jmolLink>
</jmol>

The bobble() part triggers the action. The exit ends the looping bobble.

You can try the result here:

Doesn't seem to stop!?!?


This example shows how to specify an item or items to act on by passing in a parameter.


Coding New Macros

Advanced users who want to code additional macros can get a flavor for the JSmol operating behind the scenes and ideas on how they'd code their own by examining the code for macros already available. To view an example go the Proteopedia:Macros page and note that examples such as the 'bobble()' example include notes on how you import it using script /mc/ktheis.spt. In particular note the /mc/ktheis.spt part after 'script'. That is the address of the script code stored at Proteopeida. Place that part after after http://proteopedia.org/wiki/ so you end up at http://proteopedia.org/wiki//mc/ktheis.spt where you can see the code for several defined macro functions.


Structure of UvrB in complex with ATP

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Wayne Decatur
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