1pb0: Difference between revisions

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==YCDX PROTEIN IN AUTOINHIBITED STATE==
==YCDX PROTEIN IN AUTOINHIBITED STATE==
<StructureSection load='1pb0' size='340' side='right' caption='[[1pb0]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='1pb0' size='340' side='right'caption='[[1pb0]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1pb0]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PB0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1PB0 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1pb0]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PB0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1PB0 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1m65|1m65]], [[1m68|1m68]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1m65|1m65]], [[1m68|1m68]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YCDX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YCDX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pb0 OCA], [http://pdbe.org/1pb0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1pb0 RCSB], [http://www.ebi.ac.uk/pdbsum/1pb0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1pb0 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1pb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pb0 OCA], [http://pdbe.org/1pb0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1pb0 RCSB], [http://www.ebi.ac.uk/pdbsum/1pb0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1pb0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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</StructureSection>
</StructureSection>
[[Category: Bacillus coli migula 1895]]
[[Category: Bacillus coli migula 1895]]
[[Category: Large Structures]]
[[Category: Camerini-Otero, R D]]
[[Category: Camerini-Otero, R D]]
[[Category: Gilliland, G L]]
[[Category: Gilliland, G L]]

Revision as of 10:27, 9 December 2020

YCDX PROTEIN IN AUTOINHIBITED STATEYCDX PROTEIN IN AUTOINHIBITED STATE

Structural highlights

1pb0 is a 3 chain structure with sequence from "bacillus_coli"_migula_1895 "bacillus coli" migula 1895. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Gene:YCDX ("Bacillus coli" Migula 1895)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[YCDX_ECOLI] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Redelberger D, Seduk F, Genest O, Mejean V, Leimkuhler S, Iobbi-Nivol C. YcdY protein of Escherichia coli, an atypical member of the TorD chaperone family. J Bacteriol. 2011 Dec;193(23):6512-6. doi: 10.1128/JB.05927-11. Epub 2011 Sep 30. PMID:21965574 doi:http://dx.doi.org/10.1128/JB.05927-11

1pb0, resolution 1.95Å

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