2h5f: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:


==Denmotoxin: A the three-finger toxin from colubrid snake Boiga dendrophila with bird-specific activity==
==Denmotoxin: A the three-finger toxin from colubrid snake Boiga dendrophila with bird-specific activity==
<StructureSection load='2h5f' size='340' side='right' caption='[[2h5f]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='2h5f' size='340' side='right'caption='[[2h5f]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2h5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Boiga_dendrophila Boiga dendrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2H5F FirstGlance]. <br>
<table><tr><td colspan='2'>[[2h5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Boiga_dendrophila Boiga dendrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2H5F FirstGlance]. <br>
Line 31: Line 31:
</StructureSection>
</StructureSection>
[[Category: Boiga dendrophila]]
[[Category: Boiga dendrophila]]
[[Category: Large Structures]]
[[Category: Kini, R M]]
[[Category: Kini, R M]]
[[Category: Pawlak, J]]
[[Category: Pawlak, J]]

Revision as of 13:06, 1 April 2020

Denmotoxin: A the three-finger toxin from colubrid snake Boiga dendrophila with bird-specific activityDenmotoxin: A the three-finger toxin from colubrid snake Boiga dendrophila with bird-specific activity

Structural highlights

2h5f is a 2 chain structure with sequence from Boiga dendrophila. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Boiga dendrophila (mangrove catsnake) is a colubrid snake that lives in Southeast Asian lowland rainforests and mangrove swamps and that preys primarily on birds. We have isolated, purified, and sequenced a novel toxin from its venom, which we named denmotoxin. It is a monomeric polypeptide of 77 amino acid residues with five disulfide bridges. In organ bath experiments, it displayed potent postsynaptic neuromuscular activity and irreversibly inhibited indirectly stimulated twitches in chick biventer cervicis nerve-muscle preparations. In contrast, it induced much smaller and readily reversible inhibition of electrically induced twitches in mouse hemidiaphragm nerve-muscle preparations. More precisely, the chick muscle alpha(1)betagammadelta-nicotinic acetylcholine receptor was 100-fold more susceptible compared with the mouse receptor. These data indicate that denmotoxin has a bird-specific postsynaptic activity. We chemically synthesized denmotoxin, crystallized it, and solved its crystal structure at 1.9 A by the molecular replacement method. The toxin structure adopts a non-conventional three-finger fold with an additional (fifth) disulfide bond in the first loop and seven additional residues at its N terminus, which is blocked by a pyroglutamic acid residue. This is the first crystal structure of a three-finger toxin from colubrid snake venom and the first fully characterized bird-specific toxin. Denmotoxin illustrates the relationship between toxin specificity and the primary prey type that constitutes the snake's diet.

Denmotoxin, a three-finger toxin from the colubrid snake Boiga dendrophila (Mangrove Catsnake) with bird-specific activity.,Pawlak J, Mackessy SP, Fry BG, Bhatia M, Mourier G, Fruchart-Gaillard C, Servent D, Menez R, Stura E, Menez A, Kini RM J Biol Chem. 2006 Sep 29;281(39):29030-41. Epub 2006 Jul 24. PMID:16864572[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Pawlak J, Mackessy SP, Fry BG, Bhatia M, Mourier G, Fruchart-Gaillard C, Servent D, Menez R, Stura E, Menez A, Kini RM. Denmotoxin, a three-finger toxin from the colubrid snake Boiga dendrophila (Mangrove Catsnake) with bird-specific activity. J Biol Chem. 2006 Sep 29;281(39):29030-41. Epub 2006 Jul 24. PMID:16864572 doi:10.1074/jbc.M605850200

2h5f, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA