1aut: Difference between revisions

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[[Image:1aut.gif|left|200px]]
[[Image:1aut.gif|left|200px]]


{{Structure
<!--
|PDB= 1aut |SIZE=350|CAPTION= <scene name='initialview01'>1aut</scene>, resolution 2.8&Aring;
The line below this paragraph, containing "STRUCTURE_1aut", creates the "Structure Box" on the page.
|SITE= <scene name='pdbsite=CAT:Catalytic+Site'>CAT</scene>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
|LIGAND= <scene name='pdbligand=BHD:BETA-HYDROXYASPARTIC+ACID'>BHD</scene>, <scene name='pdbligand=DPN:D-PHENYLALANINE'>DPN</scene>, <scene name='pdbligand=MAI:DEOXO-METHYLARGININE'>MAI</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein_C_(activated) Protein C (activated)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.69 3.4.21.69] </span>
or leave the SCENE parameter empty for the default display.
|GENE=  
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|DOMAIN=
{{STRUCTURE_1aut| PDB=1aut  | SCENE= }}  
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1aut FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aut OCA], [http://www.ebi.ac.uk/pdbsum/1aut PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1aut RCSB]</span>
}}


'''HUMAN ACTIVATED PROTEIN C'''
'''HUMAN ACTIVATED PROTEIN C'''
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The 2.8 A crystal structure of Gla-domainless activated protein C., Mather T, Oganessyan V, Hof P, Huber R, Foundling S, Esmon C, Bode W, EMBO J. 1996 Dec 16;15(24):6822-31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9003757 9003757]
The 2.8 A crystal structure of Gla-domainless activated protein C., Mather T, Oganessyan V, Hof P, Huber R, Foundling S, Esmon C, Bode W, EMBO J. 1996 Dec 16;15(24):6822-31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9003757 9003757]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Protein C (activated)]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Bode, W.]]
[[Category: Bode, W.]]
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[[Category: Mather, T.]]
[[Category: Mather, T.]]
[[Category: Oganessyan, V.]]
[[Category: Oganessyan, V.]]
[[Category: complex (blood coagulation/inhibitor)]]
[[Category: Glycoprotein]]
[[Category: glycoprotein]]
[[Category: Hydrolase]]
[[Category: hydrolase]]
[[Category: Plasma calcium binding]]
[[Category: plasma calcium binding]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May  2 10:43:11 2008''
[[Category: serine proteinase)]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 18:47:52 2008''

Revision as of 10:43, 2 May 2008

File:1aut.gif

Template:STRUCTURE 1aut

HUMAN ACTIVATED PROTEIN C


OverviewOverview

The structure of the Gla-domainless form of the human anticoagulant enzyme activated protein C has been solved at 2.8 A resolution. The light chain is composed of two domains: an epidermal growth factor (EGF)-like domain modified by a large insert containing an additional disulfide, followed by a typical EGF-like domain. The arrangement of the long axis of these domains describes an angle of approximately 80 degrees. Disulfide linked to the light chain is the catalytic domain, which is generally trypsin-like but contains a large insertion loop at the edge of the active site, a third helical segment, a prominent cationic patch analogous to the anion binding exosite I of thrombin and a trypsin-like Ca[II] binding site. The arrangement of loops around the active site partially restricts access to the cleft. The S2 and S4 subsites are much more polar than in factor Xa and thrombin, and the S2 site is unrestricted. While quite open and exposed, the active site contains a prominent groove, the surface of which is very polar with evidence for binding sites on the primed side, in addition to those typical of the trypsin class found on the non-primed side.

About this StructureAbout this Structure

1AUT is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

ReferenceReference

The 2.8 A crystal structure of Gla-domainless activated protein C., Mather T, Oganessyan V, Hof P, Huber R, Foundling S, Esmon C, Bode W, EMBO J. 1996 Dec 16;15(24):6822-31. PMID:9003757 Page seeded by OCA on Fri May 2 10:43:11 2008

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