S100 protein: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
 
Line 34: Line 34:


</StructureSection>
</StructureSection>
== 3D Structures of S100 proteins ==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
*S100-A1
**[[1zfs]], [[2lp2]], [[2lp3]], [[2l0p]] – hCBP-1 + Ca – human - NMR<br />
**[[5k89]] – hCBP-1 + Ca <br />
**[[2lux]] - hCBP-1 (mutant) + Ca - NMR<br />
**[[2lhl]], [[2lls]], [[2m3w]] – hCBP-1 (mutant) - NMR<br />
**[[2llt]], [[2llu]] – hCBP-1 - NMR<br />
**[[2jpt]] – bCBP-1 (mutant) – bovine - NMR  <br />
**[[1k2h]] – rCBP-1 – rat - NMR  <br />
**[[2k2f]] – rCBP-1 + Ca + ryanodine receptor peptide - NMR<br />
**[[2kbm]] – rCBP-1 + F-actin capping protein peptide - NMR<br />
*S100-A2
**[[2rgi]] – hCBP-2<br />
**[[4duq]] – hCBP-2 (mutant) + Ca  <br />
*S100-A3
**[[3psr]], [[3nsi]], [[3nso]] – hCBP-3  <br />
**[[3nsk]], [[3nsl]] – hCBP-3 (mutant)  <br />
*S100-A4 (Metastasin, Placental calcium-binding protein, Calvasculin)
**[[1m31]] – hCBP-4 - NMR  <br />
**[[2q91]] – hCBP-4  <br />
**[[3c1v]], [[3cga]], [[3ko0]], [[4hsz]] – hCBP-4 + Ca  <br />
**[[3m0w]] – hCBP-4 + Ca  + PCP<br />
**[[5lpu]] – hCBP-4 + Ca  + annexin A2<br />
**[[3zwh]], [[4cfq]], [[4cfr]] – hCBP-4 (mutant) + Ca  + myosin-9 peptide<br />
**[[4eto]] – hCBP-4 + Ca  + myosin-9 peptide<br />
**[[2lnk]] – hCBP-4 + myosin-2a peptide - NMR<br />
*S100-A5
**[[2kax]] – hCBP-5 - NMR <br />
**[[4dir]] – hCBP-5 + Ca  <br />
**[[2kay]] – hCBP-5 + Ca - NMR <br />
*S100-A6 (Calcyclin)
**[[1kso]], [[1k8u]], [[1k9p]] – hCBP-6  <br />
**[[1k96]], [[1k9k]] – hCBP-6 + Ca  <br />
**[[2m1k]] – hCBP-6 (mutant) + RAGE receptor - NMR  <br />
**[[4p2y]], [[4ybh]] – hCBP-6 + RAGE receptor + Ca + Zn  <br />
**[[1cnp]], [[1a03]], [[2cnp]], [[1jwd]] – raCBP-6 – rabbit - NMR<br />
**[[2jtt]] – raCBP-6 + calcyclin-binding protein - NMR<br />
*S100-A7 (Psoriasin)
**[[1psr]] – hCBP-7 + Ho  <br />
**[[2psr]], [[2wos]] – hCBP-7 + Zn + Ca  <br />
**[[2wnd]], [[4aqj]] – hCBP-7 (mutant) + Zn + Ca  <br />
**[[3psr]], [[2wor]] – hCBP-7 + Ca  <br />
*S100-A8 (Calgranulin-A; Migration inhibitory factor-related protein)
**[[1mr8]] – hCBP-8 + Ca  <br />
**[[5hlo]], [[5hlv]] – hCBP-8 + Ca + Zn <br />
**[[1xk4]] – hCBP-8 (mutant) + hCBP-9 (mutant) + Ca <br />
**[[4ggf]] – hCBP-8 + hCBP-9 + Ca + Mn  <br />
**[[5w1f]] – hCBP-8 (mutant) + hCBP-9 (mutant) + Ni + Ca  <br />
**[[4xjk]] – hCBP-8 (mutant) + hCBP-9 (mutant) + Ca + Mn  <br />
*S100-A9 (Calgranulin-B or Migration inhibitory factor-related protein 14)
**[[5i8n]] – hCPB-9 (mutant) - NMR  <br />
**[[1irj]] – hCBP-9 + Ca  <br />
*S100-A8 + S100-A9 (Calprotectin)
**[[4ggf]] – hCPB-9 + hCBP-8 + Mn  <br />
**[[6ds2]] – hCPB-9 + hCBP-8 (mutant) + Ni  <br />
**[[1xk4]] – hCPB-9 (mutant) + hCBP-8 (mutant) + Ca  <br />
**[[5w1f]] – hCPB-9 (mutant) + hCBP-8 (mutant) + Ca + Ni <br />
*S100-A10 ( Calpaxin; P11)
**[[1a4p]] – hCBP-10  <br />
**[[1bt6]] – hCBP-10 + annexin II <br />
**[[4drw]], [[4hrg]] – hCBP-10/annexin II + AHNAK peptide<br />
**[[4ftg]] – hCBP-10 + annexin II + AHNAK peptide<br />
**[[4hre]], [[4hrh]] – hCBP-10 + annexin II + helicase-like transcription factor<br />
*S100-A11 (Calgizzarin)
**[[2luc]] – hCBP-11 - NMR<br />
**[[1v4z]], [[1v50]] – hCBP-11 N terminal - NMR<br />
**[[1qls]] – pCBP-11 + Ca + annexin I - pig  <br />
**[[1nsh]] – raCBP-11 - NMR<br />
*S100-A12
**[[2wcf]] – hCBP-12<br />
**[[2m9g]] – hCBP-12 - NMR<br />
**[[2wce]] – hCBP-12 (mutant) <br />
**[[1e8a]], [[1gqm]] – hCBP-12 + Ca  <br />
**[[1odb]] – hCBP-12 + Cu + Ca  <br />
**[[2wc8]], [[2wcb]] – hCBP-12 + Zn  <br />
*S100-A13
**[[1yur]], [[1yus]] – hCBP-13 - NMR<br />
**[[1yut]], [[1yuu]] – hCBP-13 + Ca - NMR<br />
**[[2h2k]], [[2egd]] – hCBP-13 + Ca <br />
**[[2k8m]] – hCBP-13 + peptide - NMR<br />
**[[2ki4]] – hCBP-13 + heparin-binding growth factor - NMR<br />
**[[2ki6]] – hCBP-13 + heparin-binding growth factor + synaptotagmin-1- NMR<br />
**[[2l5x]] – hCBP-13 + interleukin-1 α - NMR<br />
**[[2le9]] – hCBP-13 + RAGEC2 - NMR<br />
**[[2kot]] – hCBP-13 + amlexanox - NMR<br />
**[[2cxj]] – CBP-13 – mouse - NMR<br />
*S100-A14
**[[2m0r]] – hCBP-14 - NMR<br />
*S100-A15 (Koebnerisin or S100-A7A)
**[[4aqi]] – hCBP-15 + Ca + Zn<br />
*S100-A16 (S100-F)
**[[2l50]] – hCBP-16 - NMR<br />
**[[2l51]] – hCBP-16 + Ca - NMR<br />
**[[3nxa]] – hCBP-16 <br />
*S100B
**[[1mq1]] – hCBP + F-actin capping protein peptide - NMR<br />
**[[1uwo]], [[2pru]] – hCBP - NMR <br />
**[[2h61]], [[3hcm]] – hCBP + Ca <br />
**[[4xyn]], [[5d7f]] – hCBP + Ca  + RAGE peptide <br />
**[[3czt]], [[3d0y]], [[3d10]] – hCBP + Zn + Ca <br />
**[[2m49]] – hCBP + fibroblast growth factor 2 - NMR<br />
**[[5csi]], [[5csj]], [[5csn]], [[5csf]] – hCBP subunit β + ribosomal protein S6 kinase α-1 peptide + Ca <br />
**[[3rm1]] – bCBP + F-actin capping protein peptide + Ca<br />
**[[1psb]] – bCBP + NDR kinase peptide - NMR<br />
**[[3iqq]] – bCBP + TRTK12 peptide <br />
**[[1cfp]] – bCBP (mutant) - NMR <br />
**[[1mho]], [[3cr4]], [[3gk1]], [[3gk2]], [[3gk4]], [[3iqo]], [[3lk0]], [[3lk1]], [[3lle]], [[3rlz]] – bCBP + Ca  <br />
**[[3cr2]], [[3cr5]] – bCBP + Zn + Ca <br />
**[[4pdz]], [[4pe0]], [[4pe1]], [[4pe4]], [[4pe7]], [[5dkn]], [[5dkq]], [[5dkr]], [[5er4]], [[5er5]] – bCBP + Ca  + inhibitor<br />
**[[4fqo]] – bCBP (mutant) + Ca  + inhibitor<br />
**[[1sym]], [[1b4c]] – rCBP – rat - NMR<br />
**[[1qlk]], [[2k7o]] – rCBP + Ca  - NMR<br />
**[[1xyd]] – rCBP + Zn + Ca  - NMR<br />
**[[1dt7]] – rCBP + Ca  + p53 peptide - NMR<br />
**[[1mwn]] – rCBP + F-actin capping protein peptide - NMR<br />
*Calbindin D9k (S100G)
**[[1clb]] – bCBP - NMR<br />
**[[1cdn]], [[1bod]], [[1d1o]] – bCBP (mutant) - NMR <br />
**[[4icb]], [[3icb]] – bCBP + Ca  <br />
**[[1ig5]] – bCBP + Mg  <br />
**[[1igv]] – bCBP + Mn  <br />
**[[1boc]], [[2bca]], [[2bcb]] – bCBP - NMR  <br />
**[[1ht9]] – bCBP (mutant) + Ca  <br />
**[[1qx2]] – bCBP (mutant) + Zn + Ca<br />
**[[1b1g]] – bCBP (mutant) + Ca - NMR  <br />
**[[1kqv]], [[1ksm]], [[1n65]] – bCBP (mutant) + Lanthanide - NMR  <br />
**[[1kcy]], [[2maz]] – bCBP (mutant) - NMR  <br />
**[[1cb1]] – CBP – pig - NMR  <br />
*Calbindin D28k
**[[2f33]], [[2g9b]] – rCBP - NMR<br />
*S100P
**[[1j55]] – hCBP + Ca  <br />
**[[1ozo]] – hCBP - NMR<br />
**[[2mjw]] – hCBP + RAGE V domain - NMR<br />
*S100Z
**[[2y5i]] – CBP + Ca - zebrafish <br />
**[[5hyd]] – hCBP  <br />
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]
<references/>
<references/>

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman