4p4m: Difference between revisions

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==Crystal structure of Leishmania infantum polymerase beta: Ternary P/T complex==
==Crystal structure of Leishmania infantum polymerase beta: Ternary P/T complex==
<StructureSection load='4p4m' size='340' side='right' caption='[[4p4m]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
<StructureSection load='4p4m' size='340' side='right'caption='[[4p4m]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4p4m]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Leiin Leiin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P4M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P4M FirstGlance]. <br>
<table><tr><td colspan='2'>[[4p4m]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Leiin Leiin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P4M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P4M FirstGlance]. <br>
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</div>
</div>
<div class="pdbe-citations 4p4m" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4p4m" style="background-color:#fffaf0;"></div>
==See Also==
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
*[[DNA polymerase beta|DNA polymerase beta]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Leiin]]
[[Category: Leiin]]
[[Category: Alonso, A]]
[[Category: Alonso, A]]

Revision as of 13:08, 25 December 2019

Crystal structure of Leishmania infantum polymerase beta: Ternary P/T complexCrystal structure of Leishmania infantum polymerase beta: Ternary P/T complex

Structural highlights

4p4m is a 3 chain structure with sequence from Leiin. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Protozoans of the genus Leishmania, the pathogenic agent causing leishmaniasis, encode the family X DNA polymerase Li Pol beta. Here, we report the first crystal structures of Li Pol beta. Our pre- and post-catalytic structures show that the polymerase adopts the common family X DNA polymerase fold. However, in contrast to other family X DNA polymerases, the dNTP-induced conformational changes in Li Pol beta are much more subtle. Moreover, pre- and post-catalytic structures reveal that Li Pol beta interacts with the template strand through a nonconserved, variable region known as loop3. Li Pol beta Deltaloop3 mutants display a higher catalytic rate, catalytic efficiency and overall error rates with respect to WT Li Pol beta. These results further demonstrate the subtle structural variability that exists within this family of enzymes and provides insight into how this variability underlies the substantial functional differences among their members.

Structures of the Leishmania infantum polymerase beta.,Mejia E, Burak M, Alonso A, Larraga V, Kunkel TA, Bebenek K, Garcia-Diaz M DNA Repair (Amst). 2014 Jun;18:1-9. doi: 10.1016/j.dnarep.2014.03.001. Epub 2014 , Mar 22. PMID:24666693[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Mejia E, Burak M, Alonso A, Larraga V, Kunkel TA, Bebenek K, Garcia-Diaz M. Structures of the Leishmania infantum polymerase beta. DNA Repair (Amst). 2014 Jun;18:1-9. doi: 10.1016/j.dnarep.2014.03.001. Epub 2014 , Mar 22. PMID:24666693 doi:http://dx.doi.org/10.1016/j.dnarep.2014.03.001

4p4m, resolution 1.92Å

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