5iyb: Difference between revisions
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==Human core-PIC in the open state== | ==Human core-PIC in the open state== | ||
<StructureSection load='5iyb' size='340' side='right' caption='[[5iyb]], [[Resolution|resolution]] 3.90Å' scene=''> | <StructureSection load='5iyb' size='340' side='right'caption='[[5iyb]], [[Resolution|resolution]] 3.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5iyb]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/ ] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IYB FirstGlance]. <br> | <table><tr><td colspan='2'>[[5iyb]] is a 23 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IYB FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ivw|5ivw]], [[5iy6|5iy6]], [[5iya|5iya]], [[5iy7|5iy7]], [[5iy8|5iy8]], [[5iy9|5iy9]], [[5iyc|5iyc]], [[5iyd|5iyd]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ivw|5ivw]], [[5iy6|5iy6]], [[5iya|5iya]], [[5iy7|5iy7]], [[5iy8|5iy8]], [[5iy9|5iy9]], [[5iyc|5iyc]], [[5iyd|5iyd]]</td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GTF2B, TF2B, TFIIB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GTF2A1, TF2A1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GTF2A2, TF2A2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), TBP, GTF2D1, TF2D, TFIID ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GTF2E1, TF2E1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GTF2E2, TF2E2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GTF2F1, RAP74 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GTF2F2, RAP30 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), TCEA1, GTF2S, TFIIS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | |||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iyb OCA], [http://pdbe.org/5iyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iyb RCSB], [http://www.ebi.ac.uk/pdbsum/5iyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iyb ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iyb OCA], [http://pdbe.org/5iyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iyb RCSB], [http://www.ebi.ac.uk/pdbsum/5iyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iyb ProSAT]</span></td></tr> | ||
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==See Also== | ==See Also== | ||
*[[RNA polymerase|RNA polymerase]] | |||
*[[TATA-Binding Protein|TATA-Binding Protein]] | *[[TATA-Binding Protein|TATA-Binding Protein]] | ||
*[[Transcription initiation factor|Transcription initiation factor]] | *[[Transcription initiation factor|Transcription initiation factor]] | ||
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[[Category: DNA-directed RNA polymerase]] | [[Category: DNA-directed RNA polymerase]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Human]] | |||
[[Category: Large Structures]] | |||
[[Category: Fang, J]] | [[Category: Fang, J]] | ||
[[Category: He, Y]] | [[Category: He, Y]] | ||
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[[Category: Tjian, R]] | [[Category: Tjian, R]] | ||
[[Category: Yan, C]] | [[Category: Yan, C]] | ||
[[Category: Initiation]] | [[Category: Initiation]] | ||
[[Category: Rna polymerase ii]] | [[Category: Rna polymerase ii]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transferase-dna complex]] | [[Category: Transferase-dna complex]] | ||