Myosin: Difference between revisions

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== 3D Structures of Myosin ==
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
* Myosin I
**[[4byf]] – hMIC + calmodulin – human<br />
**[[2xmf]] – mMI SH3 domain - mouse<br />
**[[5h53]] - rMI LC+HC + rActin – rabbit - Cryo EM<br />
**[[1lkx]], [[5ejy]] – DdMI HC - ''Dictyostelium discoideum''<br />
**[[5ejs]] – DdMI HC (mutant)<br />
**[[4a7f]] - DdMI HC + rActin + rTropomyosin – Cryo EM<br />
**[[4a7h]], [[4a7l]] - DdMI HC (mutant) + rActin + rTropomyosin – Cryo EM<br />
**[[5ibw]] – DdMIC HC + Ca-binding protein <br />
**[[2drk]], [[2drm]] – MI HC + 10-mer peptide – ''Acanthamoeba castellanii''<br />
**[[6i7e]], [[6i7d]] – MI – ''Plasmodium falciparum''<br />
*Unconventional myosin I
**[[5v7x]] – raMIB + calmodulin – rat – Cryo EM<br />
**[[6c1h]], [[6c1g]] – raMIB + calmodulin + actin – Cryo EM<br />
**[[4l79]] – raMIB + calmodulin <br />
**[[6c1d]] – raMIB + calmodulin + actin + phalloidin – Cryo EM<br />
**[[4r8g]] – mMIC C-terminal + calmodulin<br />
**[[5xgg]], [[5xg9]] – EhMIB C-terminal SH3 – ''Entamoeba histolytica''<br />
**[[6a9c]] – EhMIB C-terminal SH3 + FP10 peptide<br />
* Myosin II
**[[1o1g]], [[1o1a]] , [[1o1b]], [[1o1c]], [[1o1d]], [[1o1e]], [[1o1f]], [[1o18]], [[1o19]], [[1mvw]], [[1m8q]] – cMII RLC+ELC+HC+actin – tomography - chicken<br />
**[[3lla]] – cMII HC α-kinase domain+AMPPCP<br />
**[[3lmh]] – cMII HC α-kinase domain+ADP<br />
**[[3lmi]] – cMII HC α-kinase domain (mutant) +ATP<br />
**[[2fxm]], [[2fxo]] – hMII HC S2 fragment <br />
**[[2lnk]] – hMII HC + protein S100-A4 – NMR<br />
**[[3zwh]] - hMII HC + protein S100-A4 (mutant)<br />
**[[3i5f]] – LpMII RLC+HC+ADP+Mg – ''Loligo pealei''<br />
**[[3i5g]], [[3i5h]] – LpMII RLC+HC+ELC<br />
**[[3i5i]] – LpMII RLC+HC+ELC+SO4<br />
**[[2jhr]] – DdMII HC+ADP-VO4+pentabromopseudilin<br />
**[[2xo8]] - DdMII HC MD +pseudilin derivative<br />
**[[2y0r]], [[2y8i]], [[2y9e]], [[3myk]] - DdMII HC MD (mutant)<br />
**[[3bz7]], [[3bz9]], [[1yv3]], [[3bz8]] - DdMII HC+blebbistatin<br />
**[[3mjx]] - DdMII HC+blebbistatin + ADP-VO4<br />
**[[3mnq]] - DdMII HC MD + ADP-VO4 + reservatrol<br />
**[[4pjk]] - DdMII HC MD + ADP<br />
**[[3bas]], [[3bat]], [[1fmv]] - DdMII HC<br />
**[[1fmw]] – DdMII HC+ATP<br />
**[[1jwy]], [[1jx2]] – DdMII HC+dynamin-1<br />
**[[1d0x]], [[1d0y]], [[1d0z]], [[1d1a]], [[1d1b]], [[1d1c]] – DdMII HC (mutant)+BeF3 derivative<br />
**[[1g8x]] – DdMII+actinin 3<br />
**[[2jj9]], [[2x9h]] - DdMII HC+ADP-VO4<br />
**[[3mkd]] - DdMII HC MD (mutant) + ADP-VO4 <br />
**[[1lvk]], [[1mma]], [[1mmg]], [[1mmn]] – DdMII HC (mutant)+Mg+nucleotide<br />
**[[1myh]], [[1myk]], [[1myl]], [[3myh]], [[3myl]] - DdMII HC (mutant)<br />
**[[1mne]] - DdMII HC (mutant)+Mg+pyrophosphate<br />
**[[1vom]] - DdMII HC (truncated)+Mg+ADP-VO4<br />
**[[1mmd]], [[1w9i]], [[1w9k]]  - DdMII HC (mutant)+Mg+ADP+BeF3<br />
**[[1mnd]], [[1w9j]], [[1w9l]]  - DdMII HC (mutant)+Mg+ADP+AlF4<br />
**[[2aka]] - DdMII HC+dynamin-1<br />
**[[2xel]], [[4ae3]] – DdMII HC + inhibitor<br />
**[[6ixo]] – yMII GTD - yeast<br />
**[[1n2d]] – yMII LC+IQ2 IQ3 motifs from Myo2p<br />
**[[1m45]] - yMII LC+IQ2 motif from Myo2p<br />
**[[1m46]] - yMII LC+IQ4 motif from Myo2p<br />
**[[6ixr]], [[6ixq]], [[6ixp]] – yMII GTD (mutant) + peptide<br />
**[[2bl0]] – MII RLC +RHC – ''Physarum polycephalum''<br />
**[[5w1a]] - MII HC MD + LC – ''Drosophila melanogaster''<br />
**[[5e4h]] - smMII HC kinase domain – slime mold<br />
**[[5e9e]] - smMII HC kinase domain + AMPPNP <br />
* Myosin III
**[[2btt]] – ScMIII SH3 domain – NMR<br />
**[[1ruw]], [[1va7]] – yMIII SH3 domain
*Myosin IV
**[[3mmi]] – yMIV GTD <br />
**[[4ll6]] - yMIV GTD (mutant)<br />
**[[4ll8]] - yMIV GTD (mutant) + SHE3P<br />
**[[6qdj]] – MIV – ''Caenorhabditis elegans'' <br />
*Myosin V
**[[6eyw]] - yMV CBD<br />
* Myosin V (Unconventional myosin)
**[[1w7i]] – cMV HC+LC+Mg+ADP<br />
**[[1w7j]] - cMV HC+LC+BEFX+ADP<br />
**[[1w8j]] – cMV HC<br />
**[[1oe9]] – cMV HC+LC<br />
**[[1br2]] – cMV HC+Mg+ADP+AlF4<br />
**[[2fcd]] – ScMV LC N-terminal – ''Saccharomices cerevisiae'' – NMR<br />
**[[2fce]] – ScMV LC C-terminal – NMR<br />
**[[2f6h]] – ScMV CBD<br />
**[[1yp5]], [[1zuy]] – yMV SH3 domain<br />
**[[4zlk]] - mMVA + calmodulin<br />
**[[2ix7]] – mMVA IQ motif +apo-calmodulin <br />
**[[3wb8]] – mMVA GTD<br />
**[[4j5l]], [[4j5m]] – hMVA GTD<br />
**[[4kp3]] – mMVA GTD + RILP-like protein + melanophilin<br />
**[[4lli]] – hMVA CBD<br />
**[[4lx1]] – hMVA GTD<br />
**[[4lx2]] – hMVA GTD + melanphilin<br />
**[[5jcz]] – hMVA GTD + RAB-11<br />
**[[5jcy]] – hMVA GTD + SPIR-2<br />
**[[4lnz]] – hMVB GTD<br />
**[[4lwz]], [[4lx0]] – hMVB GTD + RAS-related protein<br />
**[[5hmp]], [[4zg4]] – hMVC <br />
**[[4l8t]] – hMVC CBD<br />
* Myosin VI
**[[2kia]] – mMVI CBD – mouse – NMR<br />
**[[2ld3]] – mMVI lever arm extension - NMR<br />
**[[3h8d]] - mMVI CBD+Dab2 peptide<br />
**[[4e7z]], [[4pk4]], [[4pjn]], [[4pjm]] - pMVI<br />
**[[4e7s]] - pMVI (mutant)<br />
**[[3gn4]], [[2vb6]] - pMVI neck+calmodulin – pig<br />
**[[2vas]], [[3l9i]] - pMVI neck (mutant)+calmodulin<br />
**[[2v26]] - pMVI neck+Mg+ADP-VO4<br />
**[[2bkh]], [[2bki]] – pMVI HC+calmodulin<br />
**[[4dbp]], [[4dbq]] – pMVI HC (mutant) + calmodulin<br />
**[[4dbr]] – pMVI HC (mutant) <br />
**[[4anj]] - pMVI HC/GFP + calmodulin<br />
**[[2x51]] - pMVI d insert1 + calmodulin<br />
**[[6bnw]], [[6bnq]], [[6bnp]] – pMVI + actin – Cryo EM<br />
**[[6bnv]] – pMVI + actin + calmodulin – Cryo EM<br />
**[[6bnv]] – MVI residus 1-69 – ''Meriones unguiculatus''<br />
*Unconventional myosin VI
**[[6j56]] – hMVI CBD + TOM1 peptide  <br />
**[[5v6h]] – mMVI + GIPC2  <br />
**[[5v6e]] – mMVI + GIPC1  <br />
**[[4pfp]], [[4pfo]], [[5o2l]] – pMVI MD  <br />
**[[4pjl]] – pMVI MD (mutant)  <br />
**[[4pjj]] – pMVI MD + calmodulin  <br />
*Myosin VII
**[[2i0n]] - DdMVII SH3 domain - NMR<br />
**[[3pvl]] - mMVII SH3 domain+hUsher syndrome type 1G protein<br />
**[[4db1]] – hMVII HC<br />
**[[5n6a]] – bMVII HC <br />
**[[5tby]] – bMVII HC + MIII LC + MLC-2V <br />
**[[6fsa]], [[5n69]] – bMVII HC + MIII LC  <br />
*Unconventional myosin VII
**[[5wst]] – mMVIIA SAH  <br />
**[[5mv7]] – hMVIIB C-terminal <br />
**[[5xbf]], [[5mv8]] – hMVIIB C-terminal + harmonin <br />
**[[5mv9]] – hMVIIA C-terminal + harmonin <br />
**[[5wsv]] – hMVIIA IQ5 + calmodulin <br />
**[[5wsu]] – hMVIIA IQ5-SAH + calmodulin <br />
**[[5f3y]] – mMVIIB + ANKS4B <br />
**[[5ejr]] – DdMVIIB MF2 domain <br />
**[[5ejq]] – DdMVIIB MF1 domain (mutant)<br />
*Unconventional myosin IX
**[[5c5s]] – hMIXB RHOGAP domain  <br />
**[[5hpy]] – hMIXB MD + RHOA  <br />
*Myosin X
**[[2lw9]] - hMX<br />
**[[3au5]] - hMX myth4-ferm tandem<br />
**[[3pzd]], [[3au4]] - hMX myth4-ferm tandem + netrin receptor DCC<br />
**[[3tfm]] – raMX phin-ph2-phic tandem (mutant)
*Unconventional myosin X
**[[5i0h]] – hMX MD  <br />
**[[5kg8]] – hMX MD + actin <br />
**[[5i0i]] – hMX MD + calmodulin <br />
**[[5hmo]] – MX SAH + coiled-coil domain - bovine <br />
*Myosin XI
**[[5t45]] – cMXI MD  <br />
**[[5m05]] – cMXI MD + inhibitor <br />
**[[3j04]] – cMXI HC + RLC – Cryo EM<br />
**[[6bih]] – cMXI HC + actin – Cryo EM<br />
*Unconventional myosin XIV
**[[6due]] – MXIV – ''Toxoplasma gondii''  <br />
*Flight muscle myosin
**[[1i84]], [[2w4a]], [[2w4g]], [[2w4h]] - cRLC+cELC+cHC – cryoEM<br />
**[[2mys]] - cRLC+cELC+cHC - papain digested<br />
**[[1lkm]] – cHC alpha-kinase domain+AMP<br />
**[[2dfs]] – cHC+calmodulin<br />
**[[1br4]] – cELC+cHC+Mg+ADP+BeF3<br />
**[[1br1]] – cELC+Mg+ADP+AlF4<br />
**[[2xrf]] – hLC <br />
**[[3jtd]], [[2w4t]], [[2w4v]], [[2w4w]], [[1scm]] – AiRLC+AiELC+AiHC - ''Argopecten irradians''<br />
**[[1b7t]] - AiRLC+AiELC+AiHC papain digested<br />
**[[3jvt]] - sRLC+sELC+sHC+Ca – Scallop<br />
**[[2ec6]], [[2os8]], [[2otg]], [[1s5g]], [[1sr6]], [[1qvi]], [[1kk7]], [[1dfk]], [[3pn7]], [[3ts5]], [[3tuy]] - sRLC+sELC+sHC<br />
**[[1kqm]] - sRLC+sELC+sHC+AMPPNP<br />
**[[1kwo]] - sRLC+sELC+sHC+ATPgS-PDM<br />
**[[1l2o]] - sRLC+sELC+sHC+ADP-PDM<br />
**[[1kk8]] - sRLC+sELC+sHC+ADP-BEFX<br />
**[[1dfl]] - sRLC+sELC+sHC+ADP-VO4+Mg<br />
**[[1wdc]] - sRLC+sELC+sHC - digested<br />
**[[3dtp]] - RLC+HC+ELC – tarantula – Cryo EM
}}
== References ==
== References ==
<references/>
<references/>


[[Category:Topic Page]]
[[Category:Topic Page]]

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Laurel Koopmans, David Canner, Alexander Berchansky, Michal Harel, Jaime Prilusky, Joel L. Sussman