6j3y: Difference between revisions

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== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/B7XBY7_9STRA B7XBY7_9STRA]] One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.[HAMAP-Rule:MF_00752] [[http://www.uniprot.org/uniprot/B6ZHF2_9STRA B6ZHF2_9STRA]] Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.[HAMAP-Rule:MF_01386] [[http://www.uniprot.org/uniprot/B6ZHF4_9STRA B6ZHF4_9STRA]] Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II.[HAMAP-Rule:MF_01378]  
[[http://www.uniprot.org/uniprot/B7XBY7_9STRA B7XBY7_9STRA]] One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.[HAMAP-Rule:MF_00752] [[http://www.uniprot.org/uniprot/B6ZHF2_9STRA B6ZHF2_9STRA]] Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.[HAMAP-Rule:MF_01386] [[http://www.uniprot.org/uniprot/B6ZHF4_9STRA B6ZHF4_9STRA]] Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II.[HAMAP-Rule:MF_01378]  
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== Publication Abstract from PubMed ==
Light-harvesting antenna systems in photosynthetic organisms harvest solar energy and transfer it to the photosynthetic reaction centres to initiate charge-separation and electron-transfer reactions. Diatoms are one of the important groups of oxyphototrophs and possess fucoxanthin chlorophyll a/c-binding proteins (FCPs) as light harvesters. The organization and association pattern of FCP with the photosystem II (PSII) core are unknown. Here we solved the structure of PSII-FCPII supercomplexes isolated from a diatom, Chaetoceros gracilis, by single-particle cryoelectron microscopy. The PSII-FCPII forms a homodimer. In each monomer, two FCP homotetramers and three FCP monomers are associated with one PSII core. The structure reveals a highly complicated protein-pigment network that is different from the green-type light-harvesting apparatus. Comparing these two systems allows the identification of energy transfer and quenching pathways. These findings provide structural insights into not only excitation-energy transfer mechanisms in the diatom PSII-FCPII, but also changes of light harvesters between the red- and green-lineage oxyphototrophs during evolution.
Structural basis for energy harvesting and dissipation in a diatom PSII-FCPII supercomplex.,Nagao R, Kato K, Suzuki T, Ifuku K, Uchiyama I, Kashino Y, Dohmae N, Akimoto S, Shen JR, Miyazaki N, Akita F Nat Plants. 2019 Aug;5(8):890-901. doi: 10.1038/s41477-019-0477-x. Epub 2019 Jul , 29. PMID:31358960<ref>PMID:31358960</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 6j3y" style="background-color:#fffaf0;"></div>
== References ==
<references/>
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</StructureSection>
</StructureSection>

Revision as of 20:22, 14 August 2019

Structure of C2S2-type PSII-FCPII supercomplex from diatomStructure of C2S2-type PSII-FCPII supercomplex from diatom

Structural highlights

6j3y is a 56 chain structure with sequence from Chaetoceros gracilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , , , , , , , , , , , ,
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[B7XBY7_9STRA] One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.[HAMAP-Rule:MF_00752] [B6ZHF2_9STRA] Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.[HAMAP-Rule:MF_01386] [B6ZHF4_9STRA] Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II.[HAMAP-Rule:MF_01378]

Publication Abstract from PubMed

Light-harvesting antenna systems in photosynthetic organisms harvest solar energy and transfer it to the photosynthetic reaction centres to initiate charge-separation and electron-transfer reactions. Diatoms are one of the important groups of oxyphototrophs and possess fucoxanthin chlorophyll a/c-binding proteins (FCPs) as light harvesters. The organization and association pattern of FCP with the photosystem II (PSII) core are unknown. Here we solved the structure of PSII-FCPII supercomplexes isolated from a diatom, Chaetoceros gracilis, by single-particle cryoelectron microscopy. The PSII-FCPII forms a homodimer. In each monomer, two FCP homotetramers and three FCP monomers are associated with one PSII core. The structure reveals a highly complicated protein-pigment network that is different from the green-type light-harvesting apparatus. Comparing these two systems allows the identification of energy transfer and quenching pathways. These findings provide structural insights into not only excitation-energy transfer mechanisms in the diatom PSII-FCPII, but also changes of light harvesters between the red- and green-lineage oxyphototrophs during evolution.

Structural basis for energy harvesting and dissipation in a diatom PSII-FCPII supercomplex.,Nagao R, Kato K, Suzuki T, Ifuku K, Uchiyama I, Kashino Y, Dohmae N, Akimoto S, Shen JR, Miyazaki N, Akita F Nat Plants. 2019 Aug;5(8):890-901. doi: 10.1038/s41477-019-0477-x. Epub 2019 Jul , 29. PMID:31358960[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Nagao R, Kato K, Suzuki T, Ifuku K, Uchiyama I, Kashino Y, Dohmae N, Akimoto S, Shen JR, Miyazaki N, Akita F. Structural basis for energy harvesting and dissipation in a diatom PSII-FCPII supercomplex. Nat Plants. 2019 Aug;5(8):890-901. doi: 10.1038/s41477-019-0477-x. Epub 2019 Jul , 29. PMID:31358960 doi:http://dx.doi.org/10.1038/s41477-019-0477-x

6j3y, resolution 3.30Å

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OCA