6ag7: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
'''Unreleased structure'''


The entry 6ag7 is ON HOLD  until Paper Publication
==The crystal structure of uPA in complex with HMA-55F==
 
<StructureSection load='6ag7' size='340' side='right'caption='[[6ag7]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
Authors: Buckley, B., Jiang, L.G., Majed, H., Huang, M.D., Kelso, M., Ranson, M.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[6ag7]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AG7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AG7 FirstGlance]. <br>
Description: The crystal structure of uPA in complex with HMA-55F
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=H55:3,5-diamino-N-carbamimidoyl-6-(1-methyl-1H-pyrazol-4-yl)pyrazine-2-carboxamide'>H55</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/U-plasminogen_activator U-plasminogen activator], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.73 3.4.21.73] </span></td></tr>
[[Category: Ranson, M]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ag7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ag7 OCA], [http://pdbe.org/6ag7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ag7 RCSB], [http://www.ebi.ac.uk/pdbsum/6ag7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ag7 ProSAT]</span></td></tr>
</table>
== Disease ==
[[http://www.uniprot.org/uniprot/UROK_HUMAN UROK_HUMAN]] Defects in PLAU are the cause of Quebec platelet disorder (QPD) [MIM:[http://omim.org/entry/601709 601709]]. QPD is an autosomal dominant bleeding disorder due to a gain-of-function defect in fibrinolysis. Although affected individuals do not exhibit systemic fibrinolysis, they show delayed onset bleeding after challenge, such as surgery. The hallmark of the disorder is markedly increased PLAU levels within platelets, which causes intraplatelet plasmin generation and secondary degradation of alpha-granule proteins.<ref>PMID:20007542</ref> 
== Function ==
[[http://www.uniprot.org/uniprot/UROK_HUMAN UROK_HUMAN]] Specifically cleaves the zymogen plasminogen to form the active enzyme plasmin.
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: U-plasminogen activator]]
[[Category: Buckley, B]]
[[Category: Huang, M D]]
[[Category: Jiang, L G]]
[[Category: Kelso, M]]
[[Category: Kelso, M]]
[[Category: Huang, M.D]]
[[Category: Majed, H]]
[[Category: Majed, H]]
[[Category: Buckley, B]]
[[Category: Ranson, M]]
[[Category: Jiang, L.G]]
[[Category: Amiloride]]
[[Category: Hydrolase]]
[[Category: Urokinase]]

Revision as of 19:25, 14 August 2019

The crystal structure of uPA in complex with HMA-55FThe crystal structure of uPA in complex with HMA-55F

Structural highlights

6ag7 is a 1 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Activity:U-plasminogen activator, with EC number 3.4.21.73
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

[UROK_HUMAN] Defects in PLAU are the cause of Quebec platelet disorder (QPD) [MIM:601709]. QPD is an autosomal dominant bleeding disorder due to a gain-of-function defect in fibrinolysis. Although affected individuals do not exhibit systemic fibrinolysis, they show delayed onset bleeding after challenge, such as surgery. The hallmark of the disorder is markedly increased PLAU levels within platelets, which causes intraplatelet plasmin generation and secondary degradation of alpha-granule proteins.[1]

Function

[UROK_HUMAN] Specifically cleaves the zymogen plasminogen to form the active enzyme plasmin.

References

  1. Paterson AD, Rommens JM, Bharaj B, Blavignac J, Wong I, Diamandis M, Waye JS, Rivard GE, Hayward CP. Persons with Quebec platelet disorder have a tandem duplication of PLAU, the urokinase plasminogen activator gene. Blood. 2010 Feb 11;115(6):1264-6. doi: 10.1182/blood-2009-07-233965. Epub 2009, Dec 9. PMID:20007542 doi:10.1182/blood-2009-07-233965

6ag7, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA