6rdf: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
m Protected "6rdf" [edit=sysop:move=sysop]
No edit summary
Line 1: Line 1:
'''Unreleased structure'''


The entry 6rdf is ON HOLD
==CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, monomer-masked refinement==
<StructureSection load='6rdf' size='340' side='right'caption='[[6rdf]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6rdf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Polytomella_sp._pringsheim_198.80 Polytomella sp. pringsheim 198.80]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RDF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RDF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rdf OCA], [http://pdbe.org/6rdf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rdf RCSB], [http://www.ebi.ac.uk/pdbsum/6rdf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rdf ProSAT]</span></td></tr>
</table>
== Function ==
[[http://www.uniprot.org/uniprot/A0ZW40_9CHLO A0ZW40_9CHLO]] Produces ATP from ADP in the presence of a proton gradient across the membrane.[RuleBase:RU003551]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
F1Fo-adenosine triphosphate (ATP) synthases make the energy of the proton-motive force available for energy-consuming processes in the cell. We determined the single-particle cryo-electron microscopy structure of active dimeric ATP synthase from mitochondria of Polytomella sp. at a resolution of 2.7 to 2.8 angstroms. Separation of 13 well-defined rotary substates by three-dimensional classification provides a detailed picture of the molecular motions that accompany c-ring rotation and result in ATP synthesis. Crucially, the F1 head rotates along with the central stalk and c-ring rotor for the first ~30 degrees of each 120 degrees primary rotary step to facilitate flexible coupling of the stoichiometrically mismatched F1 and Fo subcomplexes. Flexibility is mediated primarily by the interdomain hinge of the conserved OSCP subunit. A conserved metal ion in the proton access channel may synchronize c-ring protonation with rotation.


Authors: Murphy, B.J., Klusch, N., Yildiz, O., Kuhlbrandt, W.
Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F1-Fo coupling.,Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W Science. 2019 Jun 21;364(6446). pii: 364/6446/eaaw9128. doi:, 10.1126/science.aaw9128. Epub 2019 Jun 20. PMID:31221832<ref>PMID:31221832</ref>


Description: CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, monomer-masked refinement
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Yildiz, O]]
<div class="pdbe-citations 6rdf" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Polytomella sp. pringsheim 198 80]]
[[Category: Klusch, N]]
[[Category: Klusch, N]]
[[Category: Kuhlbrandt, W]]
[[Category: Kuhlbrandt, W]]
[[Category: Murphy, B.J]]
[[Category: Murphy, B J]]
[[Category: Yildiz, O]]
[[Category: Mitochondrial atp synthase dimer flexible coupling cryoem]]
[[Category: Proton transport]]

Revision as of 09:05, 3 July 2019

CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, monomer-masked refinementCryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, monomer-masked refinement

Structural highlights

6rdf is a 12 chain structure with sequence from Polytomella sp. pringsheim 198.80. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[A0ZW40_9CHLO] Produces ATP from ADP in the presence of a proton gradient across the membrane.[RuleBase:RU003551]

Publication Abstract from PubMed

F1Fo-adenosine triphosphate (ATP) synthases make the energy of the proton-motive force available for energy-consuming processes in the cell. We determined the single-particle cryo-electron microscopy structure of active dimeric ATP synthase from mitochondria of Polytomella sp. at a resolution of 2.7 to 2.8 angstroms. Separation of 13 well-defined rotary substates by three-dimensional classification provides a detailed picture of the molecular motions that accompany c-ring rotation and result in ATP synthesis. Crucially, the F1 head rotates along with the central stalk and c-ring rotor for the first ~30 degrees of each 120 degrees primary rotary step to facilitate flexible coupling of the stoichiometrically mismatched F1 and Fo subcomplexes. Flexibility is mediated primarily by the interdomain hinge of the conserved OSCP subunit. A conserved metal ion in the proton access channel may synchronize c-ring protonation with rotation.

Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F1-Fo coupling.,Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W Science. 2019 Jun 21;364(6446). pii: 364/6446/eaaw9128. doi:, 10.1126/science.aaw9128. Epub 2019 Jun 20. PMID:31221832[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Murphy BJ, Klusch N, Langer J, Mills DJ, Yildiz O, Kuhlbrandt W. Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F1-Fo coupling. Science. 2019 Jun 21;364(6446). pii: 364/6446/eaaw9128. doi:, 10.1126/science.aaw9128. Epub 2019 Jun 20. PMID:31221832 doi:http://dx.doi.org/10.1126/science.aaw9128

6rdf, resolution 3.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA