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==Human JMJD7 in complex with Mn and 2OG in the P21212 form== | ==Human JMJD7 in complex with Mn and 2OG in the P21212 form== | ||
<StructureSection load='5nfo' size='340' side='right' caption='[[5nfo]], [[Resolution|resolution]] 2.17Å' scene=''> | <StructureSection load='5nfo' size='340' side='right'caption='[[5nfo]], [[Resolution|resolution]] 2.17Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5nfo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NFO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NFO FirstGlance]. <br> | <table><tr><td colspan='2'>[[5nfo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NFO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NFO FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5nfn|5nfn]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5nfn|5nfn]]</td></tr> | ||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">JMJD7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nfo OCA], [http://pdbe.org/5nfo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nfo RCSB], [http://www.ebi.ac.uk/pdbsum/5nfo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nfo ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nfo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nfo OCA], [http://pdbe.org/5nfo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nfo RCSB], [http://www.ebi.ac.uk/pdbsum/5nfo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nfo ProSAT]</span></td></tr> | ||
</table> | </table> | ||
==See Also== | |||
*[[Jumonji domain-containing protein|Jumonji domain-containing protein]] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Human]] | ||
[[Category: Large Structures]] | |||
[[Category: Chowdhury, R]] | |||
[[Category: Markolovic, S]] | [[Category: Markolovic, S]] | ||
[[Category: | [[Category: Schofield, C J]] | ||
[[Category: 2-oxoglutarate]] | [[Category: 2-oxoglutarate]] | ||
[[Category: Cancer]] | [[Category: Cancer]] | ||
Revision as of 09:03, 12 June 2019
Human JMJD7 in complex with Mn and 2OG in the P21212 formHuman JMJD7 in complex with Mn and 2OG in the P21212 form
Structural highlights
See Also |
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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)
OCACategories:
- Human
- Large Structures
- Chowdhury, R
- Markolovic, S
- Schofield, C J
- 2-oxoglutarate
- Cancer
- Development
- Developmentally regulated gtp binding protein
- Dimerisation
- Dioxygenase
- Drg1
- Drg2
- Dsbh
- Facial triad
- Helix-loop-helix-beta
- Hydroxylation
- Hypoxia
- Iron
- Jmjc
- Jmjc demethylase
- Jmjc domain
- Jmjc domain-containing protein 7
- Jmjc hydroxylase
- Jmjd7
- Kdm
- Lysyl hydroxylation
- Metal-binding
- Non-heme
- Nucleic acid-binding
- Oxidoreductase
- Oxygenase
- Post-translational modification
- Ptm
- Ribosome biogenesis
- Trafac gtpase
- Translation
- Translation factor