3gra: Difference between revisions

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==Crystal structure of AraC family transcriptional regulator from Pseudomonas putida==
==Crystal structure of AraC family transcriptional regulator from Pseudomonas putida==
<StructureSection load='3gra' size='340' side='right' caption='[[3gra]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='3gra' size='340' side='right' caption='[[3gra]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PP_3526, PP3526 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160488 PSEPK])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PP_3526, PP3526 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160488 PSEPK])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gra OCA], [http://pdbe.org/3gra PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gra RCSB], [http://www.ebi.ac.uk/pdbsum/3gra PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gra TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gra OCA], [http://pdbe.org/3gra PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gra RCSB], [http://www.ebi.ac.uk/pdbsum/3gra PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gra ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3gra TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3gra_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3gra_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 08:51, 7 December 2018

Crystal structure of AraC family transcriptional regulator from Pseudomonas putidaCrystal structure of AraC family transcriptional regulator from Pseudomonas putida

Structural highlights

3gra is a 2 chain structure with sequence from Psepk. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
NonStd Res:
Gene:PP_3526, PP3526 (PSEPK)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3gra, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA