3gd5: Difference between revisions

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==Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus==
==Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus==
<StructureSection load='3gd5' size='340' side='right' caption='[[3gd5]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3gd5' size='340' side='right' caption='[[3gd5]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">argF, gll3101 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=251221 GLOVI])</td></tr>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">argF, gll3101 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=251221 GLOVI])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ornithine_carbamoyltransferase Ornithine carbamoyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.3.3 2.1.3.3] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ornithine_carbamoyltransferase Ornithine carbamoyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.3.3 2.1.3.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gd5 OCA], [http://pdbe.org/3gd5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gd5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gd5 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gd5 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gd5 OCA], [http://pdbe.org/3gd5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gd5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gd5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gd5 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3gd5 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gd/3gd5_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gd/3gd5_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 08:50, 7 December 2018

Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceusCrystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus

Structural highlights

3gd5 is a 6 chain structure with sequence from Glovi. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:argF, gll3101 (GLOVI)
Activity:Ornithine carbamoyltransferase, with EC number 2.1.3.3
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[OTC_GLOVI] Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3gd5, resolution 2.10Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA