3ec7: Difference between revisions

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==Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2==
==Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2==
<StructureSection load='3ec7' size='340' side='right' caption='[[3ec7]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
<StructureSection load='3ec7' size='340' side='right' caption='[[3ec7]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ec7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ec7 OCA], [http://pdbe.org/3ec7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ec7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ec7 PDBsum], [http://www.topsan.org/Proteins/MCSG/3ec7 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ec7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ec7 OCA], [http://pdbe.org/3ec7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ec7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ec7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ec7 ProSAT], [http://www.topsan.org/Proteins/MCSG/3ec7 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/3ec7_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/3ec7_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 00:29, 3 December 2018

Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2

Structural highlights

3ec7 is a 8 chain structure with sequence from Salty. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , , ,
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[IOLG_SALTY] Involved in the oxidation of myo-inositol (MI) to 2-keto-myo-inositol (2KMI or 2-inosose).[HAMAP-Rule:MF_01671]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ec7, resolution 2.15Å

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OCA