3bwg: Difference between revisions

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==The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168==
==The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168==
<StructureSection load='3bwg' size='340' side='right' caption='[[3bwg]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
<StructureSection load='3bwg' size='340' side='right' caption='[[3bwg]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yydK, BSU40130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yydK, BSU40130 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bwg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bwg OCA], [http://pdbe.org/3bwg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bwg RCSB], [http://www.ebi.ac.uk/pdbsum/3bwg PDBsum], [http://www.topsan.org/Proteins/MCSG/3bwg TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bwg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bwg OCA], [http://pdbe.org/3bwg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bwg RCSB], [http://www.ebi.ac.uk/pdbsum/3bwg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3bwg ProSAT], [http://www.topsan.org/Proteins/MCSG/3bwg TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/3bwg_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/3bwg_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 10:47, 31 October 2018

The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168

Structural highlights

3bwg is a 3 chain structure with sequence from Bacsu. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:yydK, BSU40130 (BACSU)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3bwg, resolution 2.09Å

Drag the structure with the mouse to rotate

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OCA