6ghj: Difference between revisions

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-'''Unreleased structure'''
-The entry 6ghj is ON HOLD  until Paper Publication
+==PepTSt in complex with tripeptide Phe-Ala-Gln==
+<StructureSection load='6ghj' size='340' side='right' caption='[[6ghj]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6ghj]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GHJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GHJ FirstGlance]. <br>
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=78M:(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE'>78M</scene>, <scene name='pdbligand=78N:(2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE'>78N</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ghj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ghj OCA], [http://pdbe.org/6ghj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ghj RCSB], [http://www.ebi.ac.uk/pdbsum/6ghj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ghj ProSAT]</span></td></tr>
+</table>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Proton-dependent oligopeptide transporters (POTs) are important for uptake of di-/tripeptides in many organisms and for drug transport in humans. The binding mode of dipeptides has been well described. However, it is still debated how tripeptides are recognized. Here, we show that tripeptides of the sequence Phe-Ala-Xxx bind with similar affinities as dipeptides to the POT transporter from Streptococcus thermophilus (PepTSt ). We furthermore determined a 2.3-A structure of PepTSt in complex with Phe-Ala-Gln. The phenylalanine and alanine residues of the peptide adopt the same positions as previously observed for the Phe-Ala dipeptide, while the glutamine side chain extends into a hitherto uncharacterized pocket. This pocket is adaptable in size and can likely accommodate a wide variety of peptide side chains. This article is protected by copyright. All rights reserved.
-Authors: Martinez Molledo, M., Quistgaard, E.M., Loew, C.
+Tripeptide binding in a Proton-Dependent Oligopeptide Transporter.,Martinez Molledo M, Quistgaard EM, Low C FEBS Lett. 2018 Sep 8. doi: 10.1002/1873-3468.13246. PMID:30194725<ref>PMID:30194725</ref>
-Description: PepTSt in complex with tripeptide Phe-Ala-Gln
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-[[Category: Unreleased Structures]]
+</div>
+<div class="pdbe-citations 6ghj" style="background-color:#fffaf0;"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
 [[Category: Loew, C]]
-[[Category: Quistgaard, E.M]]
+[[Category: Molledo, M Martinez]]
-[[Category: Martinez Molledo, M]]
+[[Category: Quistgaard, E M]]
+[[Category: Membrane protein]]
+[[Category: Mf]]
+[[Category: Peptide transporter]]
+[[Category: Pot]]