Riboswitch: Difference between revisions
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Michal Harel (talk | contribs) No edit summary |
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**[[4kqy]] – BsSAMR + SAM<br /> | **[[4kqy]] – BsSAMR + SAM<br /> | ||
**[[4oqu]] - SAMR + SAM - synthetic<br /> | **[[4oqu]] - SAMR + SAM - synthetic<br /> | ||
**[[6fz0]] - SAMR + SAM - ''Candidatus pelagibacter''<br /> | |||
*S-adenosylhomocysteine riboswitch | *S-adenosylhomocysteine riboswitch | ||
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*Lysine riboswitch | *Lysine riboswitch | ||
**[[3d0u]] – TmKR ligand-binding domain + Lysine – | **[[3dis]] – TmKR – ''Thermotoga maritima''<br /> | ||
**[[3d0u]] – TmKR ligand-binding domain + Lysine <br /> | |||
**[[3dil]], [[3dim]], [[3dio]], [[3dix]], [[3diy]], [[3diz]], [[3dj2]] – TmKR + Lys <br /> | |||
**[[3dj0]], [[3dir]] – TmKR + Lys derivative<br /> | |||
**[[3dig]] – TmKR + Cys derivative<br /> | |||
**[[3diq]] – TmKR + homoArg <br /> | |||
**[[4erj]] – TmKR + aminocaproic acid<br /> | **[[4erj]] – TmKR + aminocaproic acid<br /> | ||
**[[4erl]] – TmKR + Lys + Gly<br /> | **[[4erl]] – TmKR + Lys + Gly<br /> | ||
**[[3d0x]] - KR - synthetic<br /> | |||
*Glutamine riboswitch | *Glutamine riboswitch | ||
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**[[3f4g]], [[3f4h]] – FnFMNR + flavin derivative<br /> | **[[3f4g]], [[3f4h]] – FnFMNR + flavin derivative<br /> | ||
**[[2yif]] - FnFMNR + GTP<br /> | **[[2yif]] - FnFMNR + GTP<br /> | ||
**[[5c45]], [[5kx9]] - FnFMNR + inhibitor<br /> | **[[6dn1]], [[6dn2]], [[6dn3]] - FnFMNR + RNA<br /> | ||
**[[5c45]], [[5kx9]], [[6bfb]] - FnFMNR + inhibitor<br /> | |||
*Pre-queosine riboswitch | *Pre-queosine riboswitch | ||
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**[[4w90]], [[4w92]] – VBsAMPR + C-di-AMP + U1 small nuclear ribonucleoprotein<br /> | **[[4w90]], [[4w92]] – VBsAMPR + C-di-AMP + U1 small nuclear ribonucleoprotein<br /> | ||
**[[3muv]] – AMPR + C-di-AMP + U1 small nuclear ribonucleoprotein - synthetic<br /> | |||
**[[4qk8]] – AMPR + C-di-AMP + GTP - ''Thermoanaerobacter pseudethanolicus''<br /> | |||
**[[4qk8]], [[4qka]] – AMPR + C-di-AMP + GTP - ''Thermoanaerobacter pseudethanolicus''<br /> | |||
**[[4qlm]], [[4qln]] – AMPR + C-di-AMP - ''Thermoanaerobacter tengcongensis''<br /> | |||
**[[4qk9]] – AMPR + C-di-AMP + GTP derivative - ''Thermovirga lienii''<br /> | |||
*Glycine riboswitch | *Glycine riboswitch | ||
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**[[3pdr]] – BsMBR + Mn<br /> | **[[3pdr]] – BsMBR + Mn<br /> | ||
**[[2qbz]] – BsMBR + Mg<br /> | |||
*T-Box riboswitch | *T-Box riboswitch | ||
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**[[5u3g]] – TpR + gusanidine – ''Dikeya dadantii''<br /> | **[[5u3g]] – TpR + gusanidine – ''Dikeya dadantii''<br /> | ||
*PRPP riboswitch | |||
**[[6ck5]] – TmPRR + PRPP – ''Thermoanaerobacter mathranii''<br /> | |||
**[[6ck4]] – TmPRR + ppGpp<br /> | |||
*PFI riboswitch | *PFI riboswitch | ||