2ood: Difference between revisions

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==Crystal structure of guanine deaminase from Bradyrhizobium japonicum==
==Crystal structure of guanine deaminase from Bradyrhizobium japonicum==
<StructureSection load='2ood' size='340' side='right' caption='[[2ood]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
<StructureSection load='2ood' size='340' side='right' caption='[[2ood]], [[Resolution|resolution]] 2.62&Aring;' scene=''>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bII3846, blr3880 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224911 BRADU])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bII3846, blr3880 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224911 BRADU])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Guanine_deaminase Guanine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.3 3.5.4.3] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Guanine_deaminase Guanine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.3 3.5.4.3] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ood FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ood OCA], [http://pdbe.org/2ood PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ood RCSB], [http://www.ebi.ac.uk/pdbsum/2ood PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ood TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ood FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ood OCA], [http://pdbe.org/2ood PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ood RCSB], [http://www.ebi.ac.uk/pdbsum/2ood PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ood ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2ood TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2ood_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2ood_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 10:17, 22 August 2018

Crystal structure of guanine deaminase from Bradyrhizobium japonicumCrystal structure of guanine deaminase from Bradyrhizobium japonicum

Structural highlights

2ood is a 1 chain structure with sequence from Bradu. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:
Gene:bII3846, blr3880 (BRADU)
Activity:Guanine deaminase, with EC number 3.5.4.3
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ood, resolution 2.62Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA