2p58: Difference between revisions

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|PDB= 2p58 |SIZE=350|CAPTION= <scene name='initialview01'>2p58</scene>, resolution 1.800&Aring;
|PDB= 2p58 |SIZE=350|CAPTION= <scene name='initialview01'>2p58</scene>, resolution 1.800&Aring;
|SITE=  
|SITE=  
|LIGAND=  
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
|ACTIVITY=  
|ACTIVITY=  
|GENE= yscE, YPCD1.54, pCD29 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis]), yscF, YPCD1.55, pCD28 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis]), yscG, YPCD1.56, pCD27 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis])
|GENE= yscE, YPCD1.54, pCD29 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis]), yscF, YPCD1.55, pCD28 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis]), yscG, YPCD1.56, pCD27 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis])
|DOMAIN=
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p58 OCA], [http://www.ebi.ac.uk/pdbsum/2p58 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p58 RCSB]</span>
}}
}}


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[[Category: yscg]]
[[Category: yscg]]


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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:29:43 2008''

Revision as of 04:29, 31 March 2008

File:2p58.jpg


PDB ID 2p58

Drag the structure with the mouse to rotate
, resolution 1.800Å
Ligands:
Gene: yscE, YPCD1.54, pCD29 (Yersinia pestis), yscF, YPCD1.55, pCD28 (Yersinia pestis), yscG, YPCD1.56, pCD27 (Yersinia pestis)
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Structure of the Yersinia pestis Type III secretion system needle protein YscF in complex with its chaperones YscE/YscG


OverviewOverview

The plague-causing bacterium Yersinia pestis utilizes a type III secretion system to deliver effector proteins into mammalian cells where they interfere with signal transduction pathways that mediate phagocytosis and the inflammatory response. Effector proteins are injected through a hollow needle structure composed of the protein YscF. YscG and YscE act as "chaperones" to prevent premature polymerization of YscF in the cytosol of the bacterium prior to assembly of the needle. Here, we report the crystal structure of the YscEFG protein complex at 1.8 A resolution. Overall, the structure is similar to that of the analogous PscEFG complex from the Pseudomonas aeruginosa type III secretion system, but there are noteworthy differences. The structure confirms that, like PscG, YscG is a member of the tetratricopeptide repeat family of proteins. YscG binds tightly to the C-terminal half of YscF, implying that it is this region of YscF that controls its polymerization into the needle structure. YscE interacts with the N-terminal tetratricopeptide repeat motif of YscG but makes very little direct contact with YscF. Its function may be to stabilize the structure of YscG and/or to participate in recruiting the complex to the secretion apparatus. No electron density could be observed for the 49 N-terminal residues of YscF. This and additional evidence suggest that the N-terminus of YscF is disordered in the complex with YscE and YscG. As expected, conserved residues in the C-terminal half of YscF mediate important intra- and intermolecular interactions in the complex. Moreover, the phenotypes of some previously characterized mutations in the C-terminal half of YscF can be rationalized in terms of the structure of the heterotrimeric YscEFG complex.

About this StructureAbout this Structure

2P58 is a Protein complex structure of sequences from Yersinia pestis. Full crystallographic information is available from OCA.

ReferenceReference

Structural Characterization of the Yersinia pestis Type III Secretion System Needle Protein YscF in Complex with Its Heterodimeric Chaperone YscE/YscG., Sun P, Tropea JE, Austin BP, Cherry S, Waugh DS, J Mol Biol. 2008 Jan 5;. PMID:18281060

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