2i45: Difference between revisions

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==Crystal structure of protein NMB1881 from Neisseria meningitidis==
==Crystal structure of protein NMB1881 from Neisseria meningitidis==
<StructureSection load='2i45' size='340' side='right' caption='[[2i45]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='2i45' size='340' side='right' caption='[[2i45]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NMB1881 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 "Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NMB1881 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 "Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i45 OCA], [http://pdbe.org/2i45 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2i45 RCSB], [http://www.ebi.ac.uk/pdbsum/2i45 PDBsum], [http://www.topsan.org/Proteins/MCSG/2i45 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i45 OCA], [http://pdbe.org/2i45 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2i45 RCSB], [http://www.ebi.ac.uk/pdbsum/2i45 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2i45 ProSAT], [http://www.topsan.org/Proteins/MCSG/2i45 TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i4/2i45_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i4/2i45_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i45 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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__TOC__

Revision as of 11:35, 4 July 2018

Crystal structure of protein NMB1881 from Neisseria meningitidisCrystal structure of protein NMB1881 from Neisseria meningitidis

Structural highlights

2i45 is a 10 chain structure with sequence from "diplokokkus_intracellularis_meningitidis"_(sic)_weichselbaum_1887 "diplokokkus intracellularis meningitidis" (sic) weichselbaum 1887. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:NMB1881 ("Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2i45, resolution 2.50Å

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