6bvv: Difference between revisions

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'''Unreleased structure'''


The entry 6bvv is ON HOLD  until Paper Publication
==Nipah virus W protein C-terminus in complex with Importin alpha 3==
 
<StructureSection load='6bvv' size='340' side='right' caption='[[6bvv]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
Authors: Smith, K.M., Tsimbalyuk, S., Edwards, M.R., Aragao, D., Cross, E.M., Basler, C.F., Forwood, J.K.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[6bvv]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BVV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BVV FirstGlance]. <br>
Description: Nipah virus W protein C-terminus in complex with Importin alpha 3
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6bvt|6bvt]]</td></tr>
[[Category: Unreleased Structures]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bvv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bvv OCA], [http://pdbe.org/6bvv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bvv RCSB], [http://www.ebi.ac.uk/pdbsum/6bvv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bvv ProSAT]</span></td></tr>
[[Category: Basler, C.F]]
</table>
[[Category: Edwards, M.R]]
== Function ==
[[Category: Forwood, J.K]]
[[http://www.uniprot.org/uniprot/IMA3_HUMAN IMA3_HUMAN]] Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS. [[http://www.uniprot.org/uniprot/W_NIPAV W_NIPAV]] Prevent the establishment of cellular antiviral state by blocking the interferon-alpha/beta (IFN-alpha/beta). Interacts with host STAT1 protein in the nucleus, blocking it's phosphorylation by IFN-alpha/beta. Also blocks antiviral state induced by Toll-like receptor 3/TLR3 binding to dsRNA.
__TOC__
</StructureSection>
[[Category: Aragao, D]]
[[Category: Basler, C F]]
[[Category: Cross, E M]]
[[Category: Edwards, M R]]
[[Category: Forwood, J K]]
[[Category: Smith, K M]]
[[Category: Tsimbalyuk, S]]
[[Category: Tsimbalyuk, S]]
[[Category: Aragao, D]]
[[Category: Complex]]
[[Category: Cross, E.M]]
[[Category: Importin]]
[[Category: Smith, K.M]]
[[Category: Karyopherin]]
[[Category: Nipah virus]]
[[Category: Phosphoprotein]]
[[Category: Transport protein]]

Revision as of 10:12, 4 July 2018

Nipah virus W protein C-terminus in complex with Importin alpha 3Nipah virus W protein C-terminus in complex with Importin alpha 3

Structural highlights

6bvv is a 2 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[IMA3_HUMAN] Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS. [W_NIPAV] Prevent the establishment of cellular antiviral state by blocking the interferon-alpha/beta (IFN-alpha/beta). Interacts with host STAT1 protein in the nucleus, blocking it's phosphorylation by IFN-alpha/beta. Also blocks antiviral state induced by Toll-like receptor 3/TLR3 binding to dsRNA.

6bvv, resolution 2.30Å

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OCA