2dyk: Difference between revisions

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==Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8==
==Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8==
<StructureSection load='2dyk' size='340' side='right' caption='[[2dyk]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
<StructureSection load='2dyk' size='340' side='right' caption='[[2dyk]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TTHA1391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TTHA1391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dyk OCA], [http://pdbe.org/2dyk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dyk RCSB], [http://www.ebi.ac.uk/pdbsum/2dyk PDBsum], [http://www.topsan.org/Proteins/RSGI/2dyk TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dyk OCA], [http://pdbe.org/2dyk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dyk RCSB], [http://www.ebi.ac.uk/pdbsum/2dyk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dyk ProSAT], [http://www.topsan.org/Proteins/RSGI/2dyk TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dyk_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dyk_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 10:19, 6 June 2018

Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8

Structural highlights

2dyk is a 2 chain structure with sequence from Thet8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:TTHA1391 (THET8)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[Q5SIH8_THET8] GTPase that plays an essential role in the late steps of ribosome biogenesis.[HAMAP-Rule:MF_00195][RuleBase:RU004481]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dyk, resolution 1.96Å

Drag the structure with the mouse to rotate

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