2bjc: Difference between revisions
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
==NMR | |||
==NMR structure of a protein-DNA complex of an altered specificity mutant of the lac repressor headpiece that mimics the gal repressor== | |||
<StructureSection load='2bjc' size='340' side='right' caption='[[2bjc]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''> | <StructureSection load='2bjc' size='340' side='right' caption='[[2bjc]], [[NMR_Ensembles_of_Models | 16 NMR models]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2bjc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BJC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BJC FirstGlance]. <br> | <table><tr><td colspan='2'>[[2bjc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BJC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BJC FirstGlance]. <br> | ||
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1cjg|1cjg]], [[1efa|1efa]], [[1jwl|1jwl]], [[1jye|1jye]], [[1jyf|1jyf]], [[1l1m|1l1m]], [[1lbg|1lbg]], [[1lbh|1lbh]], [[1lbi|1lbi]], [[1lcc|1lcc]], [[1lcd|1lcd]], [[1lqc|1lqc]], [[1ltp|1ltp]], [[1osl|1osl]], [[1tlf|1tlf]]</td></tr> | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1cjg|1cjg]], [[1efa|1efa]], [[1jwl|1jwl]], [[1jye|1jye]], [[1jyf|1jyf]], [[1l1m|1l1m]], [[1lbg|1lbg]], [[1lbh|1lbh]], [[1lbi|1lbi]], [[1lcc|1lcc]], [[1lcd|1lcd]], [[1lqc|1lqc]], [[1ltp|1ltp]], [[1osl|1osl]], [[1tlf|1tlf]]</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bjc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bjc OCA], [http://pdbe.org/2bjc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bjc RCSB], [http://www.ebi.ac.uk/pdbsum/2bjc PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bjc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bjc OCA], [http://pdbe.org/2bjc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bjc RCSB], [http://www.ebi.ac.uk/pdbsum/2bjc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bjc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| Line 12: | Line 13: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/2bjc_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/2bjc_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bjc ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 29: | Line 30: | ||
==See Also== | ==See Also== | ||
*[[Lac repressor | *[[Lac repressor|Lac repressor]] | ||
== References == | == References == | ||
<references/> | <references/> | ||