2a0u: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
==Crystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolution==
==Crystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolution==
<StructureSection load='2a0u' size='340' side='right' caption='[[2a0u]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2a0u' size='340' side='right' caption='[[2a0u]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
Line 6: Line 7:
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CHR36_tmp.296 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CHR36_tmp.296 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a0u OCA], [http://pdbe.org/2a0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2a0u RCSB], [http://www.ebi.ac.uk/pdbsum/2a0u PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a0u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a0u OCA], [http://pdbe.org/2a0u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2a0u RCSB], [http://www.ebi.ac.uk/pdbsum/2a0u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2a0u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 14: Line 15:
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/2a0u_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/2a0u_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a0u ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__

Revision as of 10:19, 9 May 2018

Crystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolutionCrystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolution

Structural highlights

2a0u is a 2 chain structure with sequence from Leima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:CHR36_tmp.296 (LEIMA)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[MTNA_LEIMA] Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).[HAMAP-Rule:MF_03119]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2a0u, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA