1z67: Difference between revisions

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==Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri==
==Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri==
<StructureSection load='1z67' size='340' side='right' caption='[[1z67]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='1z67' size='340' side='right' caption='[[1z67]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yidB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198215 Shigella flexneri 2a str. 2457T])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yidB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198215 Shigella flexneri 2a str. 2457T])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z67 OCA], [http://pdbe.org/1z67 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z67 RCSB], [http://www.ebi.ac.uk/pdbsum/1z67 PDBsum], [http://www.topsan.org/Proteins/MCSG/1z67 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z67 OCA], [http://pdbe.org/1z67 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z67 RCSB], [http://www.ebi.ac.uk/pdbsum/1z67 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1z67 ProSAT], [http://www.topsan.org/Proteins/MCSG/1z67 TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z67_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z67_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z67 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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__TOC__

Revision as of 12:23, 2 May 2018

Structure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneriStructure of Homeodomain-like Protein of Unknown Function S4005 from Shigella flexneri

Structural highlights

1z67 is a 1 chain structure with sequence from Shigella flexneri 2a str. 2457t. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:yidB (Shigella flexneri 2a str. 2457T)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1z67, resolution 1.45Å

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