1vme: Difference between revisions

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==Crystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolution==
==Crystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolution==
<StructureSection load='1vme' size='340' side='right' caption='[[1vme]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1vme' size='340' side='right' caption='[[1vme]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM0755 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM0755 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vme OCA], [http://pdbe.org/1vme PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vme RCSB], [http://www.ebi.ac.uk/pdbsum/1vme PDBsum], [http://www.topsan.org/Proteins/JCSG/1vme TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vme OCA], [http://pdbe.org/1vme PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vme RCSB], [http://www.ebi.ac.uk/pdbsum/1vme PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vme ProSAT], [http://www.topsan.org/Proteins/JCSG/1vme TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vm/1vme_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vm/1vme_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vme ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__

Revision as of 10:50, 4 April 2018

Crystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolutionCrystal structure of Flavoprotein (TM0755) from Thermotoga maritima at 1.80 A resolution

Structural highlights

1vme is a 2 chain structure with sequence from Atcc 43589. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
NonStd Res:
Gene:TM0755 (ATCC 43589)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vme, resolution 1.80Å

Drag the structure with the mouse to rotate

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OCA