1v5n: Difference between revisions

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==Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana==
==Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana==
<StructureSection load='1v5n' size='340' side='right' caption='[[1v5n]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='1v5n' size='340' side='right' caption='[[1v5n]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA RAFL09-40-E23 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA RAFL09-40-E23 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v5n OCA], [http://pdbe.org/1v5n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v5n RCSB], [http://www.ebi.ac.uk/pdbsum/1v5n PDBsum], [http://www.topsan.org/Proteins/RSGI/1v5n TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v5n OCA], [http://pdbe.org/1v5n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v5n RCSB], [http://www.ebi.ac.uk/pdbsum/1v5n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1v5n ProSAT], [http://www.topsan.org/Proteins/RSGI/1v5n TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v5n_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v5n_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>

Revision as of 10:56, 28 March 2018

Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thalianaSolution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

Structural highlights

1v5n is a 1 chain structure with sequence from Arath. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:RIKEN cDNA RAFL09-40-E23 (ARATH)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA