1v8d: Difference between revisions
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==Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus== | ==Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus== | ||
<StructureSection load='1v8d' size='340' side='right' caption='[[1v8d]], [[Resolution|resolution]] 2.16Å' scene=''> | <StructureSection load='1v8d' size='340' side='right' caption='[[1v8d]], [[Resolution|resolution]] 2.16Å' scene=''> | ||
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<table><tr><td colspan='2'>[[1v8d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V8D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V8D FirstGlance]. <br> | <table><tr><td colspan='2'>[[1v8d]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V8D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V8D FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v8d OCA], [http://pdbe.org/1v8d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v8d RCSB], [http://www.ebi.ac.uk/pdbsum/1v8d PDBsum], [http://www.topsan.org/Proteins/RSGI/1v8d TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v8d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v8d OCA], [http://pdbe.org/1v8d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v8d RCSB], [http://www.ebi.ac.uk/pdbsum/1v8d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1v8d ProSAT], [http://www.topsan.org/Proteins/RSGI/1v8d TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/1v8d_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v8/1v8d_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v8d ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
Revision as of 10:32, 28 March 2018
Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilusCrystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus
Structural highlights
Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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