2g0q: Difference between revisions
No edit summary |
No edit summary |
||
| Line 8: | Line 8: | ||
|GENE= At5g39720.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana]) | |GENE= At5g39720.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana]) | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06094 AIG2]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06094 AIG2]</span> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g0q OCA], [http://www.ebi.ac.uk/pdbsum/2g0q PDBsum | |RELATEDENTRY= | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g0q OCA], [http://www.ebi.ac.uk/pdbsum/2g0q PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2g0q RCSB]</span> | |||
}} | }} | ||
| Line 35: | Line 36: | ||
[[Category: structural genomic]] | [[Category: structural genomic]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:10:18 2008'' | ||
Revision as of 03:10, 31 March 2008
| |||||||
| Gene: | At5g39720.1 (Arabidopsis thaliana) | ||||||
| Domains: | AIG2 | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Solution structure of At5g39720.1 from Arabidopsis thaliana
OverviewOverview
The three-dimensional structure of Arabidopsis thaliana protein At5g39720.1 was determined by NMR spectroscopy. It is the first representative structure of Pfam family PF06094, which contains protein sequences similar to that of AIG2, an A. thaliana protein of unknown function induced upon infection by the bacterial pathogen Pseudomonas syringae. The At5g39720.1 structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. A structural homology search revealed similarity to three members of Pfam family UPF0131. Conservation of residues in a hydrophilic cavity able to bind small ligands in UPF0131 proteins suggests that this may also serve as an active site in AIG2-like proteins.
About this StructureAbout this Structure
2G0Q is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.
ReferenceReference
Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family., Lytle BL, Peterson FC, Tyler EM, Newman CL, Vinarov DA, Markley JL, Volkman BF, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Jun 1;62(Pt, 6):490-3. Epub 2006 May 31. PMID:16754964
Page seeded by OCA on Mon Mar 31 03:10:18 2008