6f0q: Difference between revisions
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==Crystal structure of Pizza6-AYW== | |||
<StructureSection load='6f0q' size='340' side='right' caption='[[6f0q]], [[Resolution|resolution]] 1.30Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6f0q]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6F0Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6F0Q FirstGlance]. <br> | |||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6f0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6f0q OCA], [http://pdbe.org/6f0q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6f0q RCSB], [http://www.ebi.ac.uk/pdbsum/6f0q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6f0q ProSAT]</span></td></tr> | |||
</table> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
beta-propeller proteins are highly symmetrical, being composed of a repeated motif with four anti-parallel beta-sheets arranged around a central axis. Recently we designed the first completely symmetrical beta-propeller protein, Pizza6, consisting of six identical tandem repeats. Pizza6 is expected to prove a useful building block for bionanotechnology, and also a tool to investigate the folding and evolution of beta-propeller proteins. Folding studies are made difficult by the high stability and the lack of buried Trp residues to act as monitor fluorophores, so we have designed and characterized several Trp-containing Pizza6 derivatives. In total four proteins were designed, of which three could be purified and characterized. Crystal structures confirm these mutant proteins maintain the expected structure, and a clear redshift of Trp fluorescence emission could be observed upon denaturation. Among the derivative proteins, Pizza6-AYW appears to be the most suitable model protein for future folding/unfolding kinetics studies as it has a comparable stability as natural beta-propeller proteins. | |||
Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.,Noguchi H, Mylemans B, De Zitter E, Van Meervelt L, Tame JRH, Voet A Biochem Biophys Res Commun. 2018 Mar 18;497(4):1038-1042. doi:, 10.1016/j.bbrc.2018.02.168. Epub 2018 Feb 23. PMID:29481797<ref>PMID:29481797</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
<div class="pdbe-citations 6f0q" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Meervelt, L Van]] | |||
[[Category: Noguchi, H]] | [[Category: Noguchi, H]] | ||
[[Category: Voet, A | [[Category: Voet, A R.D]] | ||
[[Category: | [[Category: Zitter, E De]] | ||
[[Category: De | [[Category: Artificial protein]] | ||
[[Category: Beta propeller]] | |||
[[Category: De novo protein]] | |||
Latest revision as of 10:43, 21 March 2018
Crystal structure of Pizza6-AYWCrystal structure of Pizza6-AYW
Structural highlights
Publication Abstract from PubMedbeta-propeller proteins are highly symmetrical, being composed of a repeated motif with four anti-parallel beta-sheets arranged around a central axis. Recently we designed the first completely symmetrical beta-propeller protein, Pizza6, consisting of six identical tandem repeats. Pizza6 is expected to prove a useful building block for bionanotechnology, and also a tool to investigate the folding and evolution of beta-propeller proteins. Folding studies are made difficult by the high stability and the lack of buried Trp residues to act as monitor fluorophores, so we have designed and characterized several Trp-containing Pizza6 derivatives. In total four proteins were designed, of which three could be purified and characterized. Crystal structures confirm these mutant proteins maintain the expected structure, and a clear redshift of Trp fluorescence emission could be observed upon denaturation. Among the derivative proteins, Pizza6-AYW appears to be the most suitable model protein for future folding/unfolding kinetics studies as it has a comparable stability as natural beta-propeller proteins. Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.,Noguchi H, Mylemans B, De Zitter E, Van Meervelt L, Tame JRH, Voet A Biochem Biophys Res Commun. 2018 Mar 18;497(4):1038-1042. doi:, 10.1016/j.bbrc.2018.02.168. Epub 2018 Feb 23. PMID:29481797[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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