6ek6: Difference between revisions

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-'''Unreleased structure'''
-The entry 6ek6 is ON HOLD
+==Crystal structure of KDM5B in complex with S49195a.==
+<StructureSection load='6ek6' size='340' side='right' caption='[[6ek6]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-Authors: Srikannathasan, V., Szykowska, A., Newman, J.A., Ruda, G.F., Strain-Damerell, C., Burgess-Brown, N.A., Vazquez-Rodriguez, S., Wright, M., Brennan, P.E., Arrowsmith, C.H., Edwards, A., Bountra, C., Oppermann, U., Huber, K., von Delft, F.
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6ek6]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6EK6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6EK6 FirstGlance]. <br>
-Description: Crystal structure of KDM5B in complex with S49195a.
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=90V:N-{(3R)-1-[3-(PROPAN-2-YL)-1H-PYRAZOLE-5-CARBONYL]PYRROLIDIN-3-YL}CYCLOPROPANECARBOXAMIDE'>90V</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-[[Category: Unreleased Structures]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ek6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ek6 OCA], [http://pdbe.org/6ek6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ek6 RCSB], [http://www.ebi.ac.uk/pdbsum/6ek6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ek6 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/KDM5B_HUMAN KDM5B_HUMAN]] Histone demethylase that demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9' or H3 'Lys-27'. Demethylates trimethylated, dimethylated and monomethylated H3 'Lys-4'. Acts as a transcriptional corepressor for FOXG1B and PAX9. Favors the proliferation of breast cancer cells by repressing tumor suppressor genes such as BRCA1 and HOXA5. In contrast, may act as a tumor suppressor for melanoma.<ref>PMID:12657635</ref> <ref>PMID:16645588</ref> <ref>PMID:17320161</ref> <ref>PMID:17363312</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Arrowsmith, C H]]
+[[Category: Bountra, C]]
+[[Category: Brennan, P E]]
+[[Category: Burgess-Brown, N A]]
+[[Category: Delft, F von]]
+[[Category: Edwards, A]]
 [[Category: Huber, K]]
-[[Category: Ruda, G.F]]
+[[Category: Newman, J A]]
-[[Category: Arrowsmith, C.H]]
 [[Category: Oppermann, U]]
+[[Category: Ruda, G F]]
+[[Category: Srikannathasan, V]]
+[[Category: Strain-Damerell, C]]
 [[Category: Szykowska, A]]
-[[Category: Burgess-Brown, N.A]]
-[[Category: Von Delft, F]]
 [[Category: Vazquez-Rodriguez, S]]
-[[Category: Brennan, P.E]]
-[[Category: Newman, J.A]]
-[[Category: Edwards, A]]
-[[Category: Strain-Damerell, C]]
 [[Category: Wright, M]]
-[[Category: Srikannathasan, V]]
+[[Category: Kdm5b]]
-[[Category: Bountra, C]]
+[[Category: Oxidoreductase]]