1ovy: Difference between revisions
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==Solution Structure of Ribosomal Protein L18 from Bacillus stearothermophilus== | ==Solution Structure of Ribosomal Protein L18 from Bacillus stearothermophilus== | ||
<StructureSection load='1ovy' size='340' side='right' caption='[[1ovy]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> | <StructureSection load='1ovy' size='340' side='right' caption='[[1ovy]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> | ||
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<table><tr><td colspan='2'>[[1ovy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OVY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OVY FirstGlance]. <br> | <table><tr><td colspan='2'>[[1ovy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OVY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OVY FirstGlance]. <br> | ||
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPLR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr> | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RPLR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 ATCC 12980])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ovy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ovy OCA], [http://pdbe.org/1ovy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ovy RCSB], [http://www.ebi.ac.uk/pdbsum/1ovy PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ovy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ovy OCA], [http://pdbe.org/1ovy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ovy RCSB], [http://www.ebi.ac.uk/pdbsum/1ovy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ovy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ov/1ovy_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ov/1ovy_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</div> | </div> | ||
<div class="pdbe-citations 1ovy" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 1ovy" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 10:49, 15 February 2018
Solution Structure of Ribosomal Protein L18 from Bacillus stearothermophilusSolution Structure of Ribosomal Protein L18 from Bacillus stearothermophilus
Structural highlights
Function[RL18_GEOSE] This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. Publication Abstract from PubMedA medium resolution solution structure has been obtained for L18 from Bacillus stearothermophilus (BstL18), a ribosomal protein that stabilizes the tertiary structure of 5S rRNA and mediates its interaction with the rest of the large subunit. The N-terminal 22 amino acid residues of BstL18 are unstructured in solution. Its remaining 98 residues form a globular domain that has the same topology as the globular domains of other L18s, but the orientation of helices is different. This conformational peculiarity should not prevent BstL18 from functioning in the ribosome the same way as other L18s. The solution structure of ribosomal protein L18 from Bacillus stearothermophilus.,Turner CF, Moore PB J Mol Biol. 2004 Jan 16;335(3):679-84. PMID:14687565[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References |
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